Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2943 ATGTTGAAATTGTTTACTCTTCGGGGACTGCCATGGGGCTCCAGTGGTGGTCAGGAAAAGgtTGAGCTAACAGCTGCTGAAGTAGAGTCACTTCGATCAGAACTTGCTGACATAGAAGAGAGGGAAGCTCAGTTGAAGGCGCAGTTGGAAAATATTGACGAAATTTTGCGGTCAGCTCGTCTATGTGGTTATTTGTACATTCGAACAAGATGGACAGCACTTCCAGGAGAACCTCCACCTATAGATGATACTGTCGTAGATGATTGGCTTCCTCGCTTTGCTGTTCTTTTGGGTGCATGCCTATACTTGTATTTGTTGTGTACAGATCTAAGTCCTCACGATTCAACGCTCCTGTCTGATATTGTTGAAGTAGACCAACTACCAAGTTTTAAGCGTGAAGATGATGATGAGATGCGATAcgccttttatattttaactcgTCATGGTTTACGATATGAATGCTCAAGCAGTTCTAAGATACAGGTGGACTCCTGGTTATCAGCTTTACGCTCTGACTGGAAATTGGAATCTCATACGTCAACTCCCAATGGTTCAGTAGAGATgtaa 567 0.4162 MLKLFTLRGLPWGSSGGQEKVELTAAEVESLRSELADIEEREAQLKAQLENIDEILRSARLCGYLYIRTRWTALPGEPPPIDDTVVDDWLPRFAVLLGACLYLYLLCTDLSPHDSTLLSDIVEVDQLPSFKREDDDEMRYAFYILTRHGLRYECSSSSKIQVDSWLSALRSDWKLESHTSTPNGSVEM 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2943 188 PANTHER OS05G0595500 PROTEIN 1 187 - -
Ssu2g2943 188 PANTHER OS05G0595500 PROTEIN 1 187 - -
Ssu2g2943 188 SUPERFAMILY PH domain-like 52 171 - -
Ssu2g2943 188 Coils Coil 21 58 - -
Ssu2g2943 188 Gene3D - 42 172 IPR011993 -
Ssu2g2943 188 ProSiteProfiles PH domain profile. 58 174 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2943 Ssu-Chr2 90895213 90897764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2943 - K00940 gmx:100803809 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2943 2 90895213 90897764 Ssu2g2943 2 90895213 90897764 ECH
Ssu2g2943 2 90895213 90897764 Ssu5g3149 5 79749565 79759897 PCT