Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2941 ATGGCACAGAAGAGATTCATCATTGAGGTCGAGAAAGCGAAGGAGGCGAGCGAAGGAAGGCCATCGAGAGGACCTGGGTACCGTAGCCTCTTCGCCAAGGATGGATTCCCTGCTCCTGTCCAAGGTCTCGATAGCTGCTGGGACGTTTTCCAAATGTCTGTTGAGAAATATCCTACAAACCCAATGCTTGGTCGCAGGGAAATTGTGGATGGGAAGCCTGGAAAGTACAAGTGGCTAACTTACAAAGAAGTATATGACCTGGTGATGAAATTAGGAAATTCCATCCGCAGCTGTGGTTATGGAGAAGGTGTAAAATGTGGTATTTATGGTGCCAATTGTACAGAATGGATTATGAGCATGGAgGCCTGCAATGCTCATGGACTTTATTGCGTTCCTTTATATGATACCTTGGGTGCTGGGGCTGTAGAGTTTATTATATGCCATGCAGAGGTCTCAATCGCATTTGCAGAAGAAGAAAAGATACCTGAGCTATTGAAGACATTTCCAAATTCAACAAAGTATCTTAGGACAATTGTAAGCTTTGGAAAGGTTACCCCTGAACAAAAGCAAGAAGTTGAAAAGTTTGGGTTGGCAATATATTCATGGGATGAATTTTTACAAGTGGGTCAAAATCAGAGTTTTGATCTTCCTATGAAGAAAAGGAGTGACATCTGTACAATAATGTATACTAGTGGAACTACTGGTGACCCCAAGGGAGTGTTGATATCAAATGAGAGTATTATTACTCTCTTAGCTGGGGTTAAGCGACTGTTGGAGAGTGTCAATGAACagTTGAATGAGAAGGATGTATACATATCATACCTTCCTCTCGCACATATCTTTGATAGGGTCATTGAGGAGACATTCATATGGCATGGTGCCTCAATAGGTTTCTGGCGTGGGGATGTCAAATTGTTAATTGAAGATATTGGGGAATTAAAACCAACTATTTTCTGTGCTGTTCCCCGTGTGCTTGATAGAGTGTACTCAGGTTTGACACAAAAGATTTCTTCTGGTGGCTTCTTAAAGAAGACATTATTCAACTTTGCTTATTCATATAAGCTGAATAACATGAAGAAAGGGCTTACACATGGAGATGCATCTCCGCTTCTTGATGCAATTGTGTTTGATAAGGTAAAGCAAGGTTTAGGGGGTAGAGTACGTCTTATTTTATCTGGAGCAGCACCTTTATCTGCACATGTGGAAGGTTACTTACGGGTGGTTTCTTGTGCTCATGTCCTGCAAGGATATGgtcTGACTGAAACCTGTGCGGGAACCTTTGTCTCATTaccaaatgaaatagaaatgcTTGGAACAGTGGGCCCTCCTGTACCAAATGTGGATGTGTGCCTGGAATCTGTTCCTGAAATGGGATATGATGCCCTAGCAAGCAGACCAAGAGGAGAAATTTGTGTAAAGGGAAAAACCTTGTTTTCAGGGTACTACAAACGTGAAGACCTCACCAAAGAGGTTCTGATCGATGGATGGTTCCATACAGGGGATATTGGAGAGTGGCAACCTAATGGAAGCATGAAAATTATTGATCGgaagaagaatatatttaaactttcaCAAGGAGAATATGTTGCTGTCGAAAACCTGGAGAATATTTACAGTCAAGTTTCTTCTGTTGAATCTATATGGATTTATGGAAACAGTTTCGAGGCCTTCCTTGTTGCTGTTGTTAACCCCAGTAAGCAAGCACTTGAACATTGGGCACAAGAAAATGGTATATCCATGGACTTCAATTCTCTCTGTGAAGATTCCAGAGCTAAAAGTTACATACTTGAAGAGCTCTCAAAGATTGCGAAGGAAAAAAAGTTGAAAGGTTTTGAGTTTATAAAAGGAGTTCACCTTGACCCAGTTCCATTTGACATGGAACGTGACCTTATCACTCCAACATATAAGAAGAAGAGGCCTCAGTTGCTTAAATACTATCAGAATGCCATTGACAACATGTACAAGAGTGGAAGTAAACCCAGTGCCTGA 1989 0.4062 MAQKRFIIEVEKAKEASEGRPSRGPGYRSLFAKDGFPAPVQGLDSCWDVFQMSVEKYPTNPMLGRREIVDGKPGKYKWLTYKEVYDLVMKLGNSIRSCGYGEGVKCGIYGANCTEWIMSMEACNAHGLYCVPLYDTLGAGAVEFIICHAEVSIAFAEEEKIPELLKTFPNSTKYLRTIVSFGKVTPEQKQEVEKFGLAIYSWDEFLQVGQNQSFDLPMKKRSDICTIMYTSGTTGDPKGVLISNESIITLLAGVKRLLESVNEQLNEKDVYISYLPLAHIFDRVIEETFIWHGASIGFWRGDVKLLIEDIGELKPTIFCAVPRVLDRVYSGLTQKISSGGFLKKTLFNFAYSYKLNNMKKGLTHGDASPLLDAIVFDKVKQGLGGRVRLILSGAAPLSAHVEGYLRVVSCAHVLQGYGLTETCAGTFVSLPNEIEMLGTVGPPVPNVDVCLESVPEMGYDALASRPRGEICVKGKTLFSGYYKREDLTKEVLIDGWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYSQVSSVESIWIYGNSFEAFLVAVVNPSKQALEHWAQENGISMDFNSLCEDSRAKSYILEELSKIAKEKKLKGFEFIKGVHLDPVPFDMERDLITPTYKKKRPQLLKYYQNAIDNMYKSGSKPSA 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2941 662 Pfam AMP-binding enzyme 54 524 IPR000873 -
Ssu2g2941 662 Gene3D - 42 516 IPR042099 -
Ssu2g2941 662 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 657 - -
Ssu2g2941 662 SUPERFAMILY Acetyl-CoA synthetase-like 43 655 - -
Ssu2g2941 662 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 5 657 - -
Ssu2g2941 662 CDD LC-FACS_euk 74 655 IPR045311 GO:0004467|GO:0006631
Ssu2g2941 662 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2941 Ssu-Chr2 90849246 90858668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2941 3 656 Acyl Lipid Metabolism Gene Families AT4G23850 75.535 0.0 1070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2941 K01897 - gmx:100814965 1286.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2941 2 90849246 90858668 Ssu2g2941 2 90849246 90858668 ECH
Ssu2g2941 2 90849246 90858668 Ssu5g3148 5 79736097 79744111 PCT