Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2883 atgaaagatcCGGAGAAACTAATGTGGGATCAGGGTCGAAGTCCCGCCCAGCCACGCCCCTGGCCCTCACAGAAGCTTATGGTGTGGCTGATCCTCTTCGTTTCCCTAACCTACATCTTTTACATGCTCAAGCTGGTCTCGACGTCAGCGTCAAGCACGTGCAACCACGCGCCTTCCTCCGTCGTCCGCCTCTCCTCCCCAAACGTAACGGAGAAGCATGAGCAGAAAACGGAGCTCCGTCACGTGGTGTTCGGAATCGCGGCGTCCTCGAAGCTGTGGGAGCACAGAAAGAAGTACATAAAGCTTTGGTACAAGAAAAAGGAGATGAGGGGCGTGGTGTGGGTGGACGATCGCGTGAAGACGGAGCCGAAGGAGGCAGGGTTGCCAGCTGTGAAGATTTCGACCGACACATCCAATTTACTTTACACGAACAAGCAGGGTCACCGCTCCGCCATTCGAATCTCGCGCATCGTGTCCGAAACGCTGCGTTTGGGGCTCAGGGACGTGCGCTGGTTCGTCATGGGCGACGACGACACCGTTTTTGTCACCGACAACCTCCTCAGGATCCTCAACAAGTACGACCACAACCAGCTGTACTACATTGGGAGCTTGTCGGAGAGTCATTTGCagaacattttcttttcctacgGAATGGCCTACGGTGGAGGTGGTTTTGCCATTAGTTACCCCTTGGCGAAAGCTCTGCTGAAAATGCAGGACCGTTGCATTCAGAGGTACCCAGCTCTGTATGGCTCCGACGATCGAATGCAAGCTTGTATGGCTGAACTCGGTGTTCCACTCACTAAGGAAATCGGCTTCCACCAGTATGATGTGTATGGGAACCTGTTCGGGCTTCTTGCAGCTCATCCAGTGACTCCATTGGTGTCACTGCACCACCTTGATGTGGTTGAGCCAATCTTCCCCAATGCCTCTAGAGTAGAAGCCCTTCAACGGCTTACCATACCAATGAAGCTTGACTCAGCGGCTCTCTTTCAGCAATCCATTTGCTAcgacaaaaaaaggaaatggaCCATTTCAGTTTCATGGGGTTTTGCTGTTCAAATATTCCGTGGCATATTTTCTCCTCGAGAGATGGAAATGCCCTCAAGAACGTTCCTGAATTGGTATAGGAGAGCAGATTACACGGCGTATGCTTTCAACACACGTCCGGTTAGCCGAAACCCATGTCAGAAGCCTTTCGTGTTTTACTTTTCAAAGGCAAAACTCAATTCTACATTGCGACAGACAGTGACTGAATATGAAAGATATCGCGTTCCCCATCCAGAATGTCGGTGGAAGATGGCTGATCCTTCTGCTCTTGACAAAGTAATGGTACATAAGAAGCCAGACCCGCATCTATGGGATAGAGCCCCAAGGAGAAACTGTTGCAGAGTGATGAAGTCGAACAAGAAAGGAACCATGGAGATAGATGTGGGTATATGTAGAGATGGTGAGATCAGCGAACCTTAG 1470 0.4939 MKDPEKLMWDQGRSPAQPRPWPSQKLMVWLILFVSLTYIFYMLKLVSTSASSTCNHAPSSVVRLSSPNVTEKHEQKTELRHVVFGIAASSKLWEHRKKYIKLWYKKKEMRGVVWVDDRVKTEPKEAGLPAVKISTDTSNLLYTNKQGHRSAIRISRIVSETLRLGLRDVRWFVMGDDDTVFVTDNLLRILNKYDHNQLYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALLKMQDRCIQRYPALYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNASRVEALQRLTIPMKLDSAALFQQSICYDKKRKWTISVSWGFAVQIFRGIFSPREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSKAKLNSTLRQTVTEYERYRVPHPECRWKMADPSALDKVMVHKKPDPHLWDRAPRRNCCRVMKSNKKGTMEIDVGICRDGEISEP 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2883 489 PANTHER FRINGE-RELATED 10 488 - -
Ssu2g2883 489 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 10 488 - -
Ssu2g2883 489 Pfam Protein of unknown function, DUF604 210 463 IPR006740 -
Ssu2g2883 489 Gene3D - 69 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2883 Ssu-Chr2 90049876 90053872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2883 5 488 Glycosyltransferase AT4G23490 67.767 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2883 - - gmx:100801504 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2883 2 90049876 90053872 Ssu2g2883 2 90049876 90053872 ECH
Ssu2g2883 2 90049876 90053872 Ssu5g3086 5 78560810 78563830 PCT