Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2848 ATGGCCAAGGTTTACCCTCAGGAACCCACTTCCTCTCCCTGCATGTCCTATGGACGAGAAACATATACCCTCTGGTTGAAATCACTTGTTTTTCACTCTAACGGTTGCACTGTGTATGATTCAAATGGTGTGATCGTTTATCGCGTTGATAACTACGACACAAAGGGTAGAAGAGACGTAAACCTCTTGGACCTGCGAGGCAGAGTTCTCTGTACTATACACAAGAGACTACTGGCTTTTGGACGTTGGGATGTCTATAGATGTAGCGATTCTAACTGCAAAACCCAGGAAAAGCCGTGGTTTCAAGTTAAAAGATGTTACAAGATTATCACCCGAAAAGTAACGTGCCAGATTACAGTGGAGTGCCAAAAGTACTGCATAGAGAAAACCGGTGGCAAAACAGCATTTCGGATTGTCGACATAGATGGAGACATAGTCGCCGATGCAAAGCAAAAGCACTCCTCCTCAGGAGTTGTACTGGGTAATGATGTTCTATCGTTGGATGTGGAGGGCGGCATAGATCATGCTCTTATAATGGCTTTTGTCACTGTGTTCGGATTAATCTGCGGCAGAATGTGA 579 0.4473 MAKVYPQEPTSSPCMSYGRETYTLWLKSLVFHSNGCTVYDSNGVIVYRVDNYDTKGRRDVNLLDLRGRVLCTIHKRLLAFGRWDVYRCSDSNCKTQEKPWFQVKRCYKIITRKVTCQITVECQKYCIEKTGGKTAFRIVDIDGDIVADAKQKHSSSGVVLGNDVLSLDVEGGIDHALIMAFVTVFGLICGRM 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2848 192 PANTHER PROTEIN LURP-ONE-RELATED 4 2 191 - -
Ssu2g2848 192 Pfam LURP-one-related 10 184 IPR007612 -
Ssu2g2848 192 PANTHER - 2 191 IPR007612 -
Ssu2g2848 192 SUPERFAMILY Tubby C-terminal domain-like 11 189 IPR025659 -
Ssu2g2848 192 Gene3D - 14 191 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2848 Ssu-Chr2 89551666 89552535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2848 - - gmx:100815833 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2848 2 89551666 89552535 Ssu2g2848 2 89551666 89552535 ECH
Ssu2g2848 2 89551666 89552535 Ssu5g3039 5 77808296 77809097 PCT