Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2846 ATGGGAGAAGAGGTGTACAACAATACCGAACAACAGCCACACTCTGTGTACTCTGTTCCCGAAGAAGAGCAGCCCCCTGTTCAGGAAAAGGAATTGGAGAAACCTGACCCTCCAAACGATGTTGTTAGCCCTGAGCCCAACGAGAAGGTCACTTCTCCTTCTCCAGTTGTTCAAAATGTTGCAGATCATGCTGATAAAAAGGATATAGGAGATTCAGTGGACAAAGATGCTTTGCTTGCAAGAGTTGTAGCAGAGAAAAGATTGGCTTTAATTAAAGCATgggaagaaagtgaaaagacAAAAGCAGAGAACAGGGCATACAAGAAGCACTCTGCTGTTGGATTGTGGGAGGATAGCAAGAAAGCATCAGTAGAGGCACAACTCAAGAAAATTGAGgaaaacatggaaagaaagaaGGCCGAGTACgttgaaaaaatgaagaataaagTTGCTGAAATCCACCGGTTAGCAGAAGAGAAGAGAGCAATTGTTGAGGCTCAGAAAAGGGAAGAATTCCTCGACCTAGAGGAGACAGCTGCAAAGTTTCGTAGCCGTGGAGATACACCGAGGAAATTATTTGCATGCTTTAGCGGCTAA 597 0.407 MGEEVYNNTEQQPHSVYSVPEEEQPPVQEKELEKPDPPNDVVSPEPNEKVTSPSPVVQNVADHADKKDIGDSVDKDALLARVVAEKRLALIKAWEESEKTKAENRAYKKHSAVGLWEDSKKASVEAQLKKIEENMERKKAEYVEKMKNKVAEIHRLAEEKRAIVEAQKREEFLDLEETAAKFRSRGDTPRKLFACFSG 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2846 198 PANTHER CARBOXY-TERMINAL REGION REMORIN 1 197 - -
Ssu2g2846 198 Coils Coil 121 176 - -
Ssu2g2846 198 MobiDBLite consensus disorder prediction 1 58 - -
Ssu2g2846 198 PANTHER OS02G0117200 PROTEIN 1 197 - -
Ssu2g2846 198 MobiDBLite consensus disorder prediction 24 38 - -
Ssu2g2846 198 MobiDBLite consensus disorder prediction 1 18 - -
Ssu2g2846 198 Pfam Remorin, C-terminal region 86 191 IPR005516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2846 Ssu-Chr2 89491470 89494073 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2846 - - aprc:113868558 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2846 2 89491470 89494073 Ssu2g2846 2 89491470 89494073 ECH
Ssu7g0773 7 15569793 15571964 Ssu2g2846 2 89491470 89494073 ECH
Ssu3g0760 3 18234574 18239319 Ssu2g2846 2 89491470 89494073 ECH
Ssu2g2846 2 89491470 89494073 Ssu7g0773 7 15569793 15571964 ECH
Ssu2g2846 2 89491470 89494073 Ssu3g0760 3 18234574 18239319 ECH