Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2805 ATGGCTAGCAAATTGGTCTTCACGCTGACAAACCCGCGTCCATTCACTGCTCCTACACCAACACCCTTGACTCCAATCTCTTCCTTATCCTCCACTTCTGCTTCTCGACTACACCTTGTTCAATCCAATGGCCGCCACTTATGCCTTCGCCGCCGACTATTTGTGTTTTCCCCCAAGGCCACCGCCGATCAAGGCAAGGTTGAGGAAGATGCTGTTGTTGATAGTAAAATCCTACCCTATTGTAGCATagacaaaaaagagaagaaatctATTGGGGAACTTGAGCAAGAATTTCTTCAAGCACTGCAAGCGTTCTATTATGAGGGGAAGGCTATTATGTCAAATGAGGAATTTGATAATCTTAAGGAAGAACTCATGTGGGAAGGGAGCAGCGTTGTGATGCTAAGTTCTGATGAGCAAAAATTTCTGGAAGCGTCTATAGCTTATGTGTCTGGAAAACCAATCATGAACGACAAAGAGTTTGATGACTTGAAACTCAGGCTAAAGATGGAAGGGAGTGAAATTGTGGCTGAGGGTCCACGGTGCAGTCTTCGTAGTAGAAAGGTTTACAGTGACCTGTCTGTTGACTATTTAAAGATGTTCCTGCTGAACGTCCCAGCAACTGTGATTGCACTAGGATTGTTCTTCTTCCTTGATGATTTGACTGGATTTGAGGTCTCATATCTGATAAAGATTCCAGAGCCTTATAGTTTCATTTTGACTTGGTTTGCCGCTATTCCCTTTATTGTGTGGCTGGCTCAATCAATTACAAGGGcaattgtaaaagattttttgattttaaagGGCTCCTGTCCTAACTGTGGTACTGAAAATACCTCTTTCTTTGGGACTATACTGTCAATTTCAAGTGGCGATTCCACCAACAATGTCAAATGTGAAAAGCATGCTTGCGTTTCCTGCAATGAGATGAGGTCATCATGGATAGAAGATACTTACATGTGGAAGCTAGTGACTAATTTATCAAGTCAGGAACGCATGGTCATGGATCCCCTATAG 1017 0.4159 MASKLVFTLTNPRPFTAPTPTPLTPISSLSSTSASRLHLVQSNGRHLCLRRRLFVFSPKATADQGKVEEDAVVDSKILPYCSIDKKEKKSIGELEQEFLQALQAFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASIAYVSGKPIMNDKEFDDLKLRLKMEGSEIVAEGPRCSLRSRKVYSDLSVDYLKMFLLNVPATVIALGLFFFLDDLTGFEVSYLIKIPEPYSFILTWFAAIPFIVWLAQSITRAIVKDFLILKGSCPNCGTENTSFFGTILSISSGDSTNNVKCEKHACVSCNEMRSSWIEDTYMWKLVTNLSSQERMVMDPL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2805 338 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 1 301 IPR039987 GO:0009535|GO:0009773|GO:0016730
Ssu2g2805 338 PANTHER PGR5-LIKE PROTEIN 1A 1 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2805 Ssu-Chr2 88949038 88954374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2805 - - gmx:100785186 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2805 2 88949038 88954374 Ssu2g2805 2 88949038 88954374 ECH
Ssu6g1539 6 25288164 25291716 Ssu2g2805 2 88949038 88954374 PCT