Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2787 ATGGCCGATCTGTTTGCCTGGCTTATCTCCTTCTTCCTCCTTGTTGCCTTACTTGTCCTCGTCACTTACCAGCTAATGTGCCTGGCAGACCTagaatttgattatataaatccTTATGACTCCTCCTCTCGAATAAATATGGTGGTTTTTCCTGAATTTATTACGCAAGCTGTCCTATGCTGCTTCTACCTTGTTACGAGGCATTGGATTATGGCGCTGTTCTGCGCTCCTTATCTTTTCTTCAATATCCGATTGTATAGACAAAGAAGGCATTTGGTTGATGTTACTGAGATATTCAACCTGCTCTCTTGGGAAAAGAAGCAACGGCTTGTTAAACTCTTCTATCTTGTTTTTACCCTTTTCCTCTCTGTATTTTGGATGATTTACACATCATTGGATCAGTAG 405 0.3975 MADLFAWLISFFLLVALLVLVTYQLMCLADLEFDYINPYDSSSRINMVVFPEFITQAVLCCFYLVTRHWIMALFCAPYLFFNIRLYRQRRHLVDVTEIFNLLSWEKKQRLVKLFYLVFTLFLSVFWMIYTSLDQ 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2787 134 PANTHER CORNICHON FAMILY PROTEIN 1 133 - -
Ssu2g2787 134 PANTHER CORNICHON-RELATED 1 133 - -
Ssu2g2787 134 SMART Cornichon_2 4 125 IPR003377 GO:0016192
Ssu2g2787 134 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2787 Ssu-Chr2 88691053 88692899 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2787 K20368 - gmx:100780362 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2787 2 88691053 88692899 Ssu2g2787 2 88691053 88692899 ECH
Ssu6g1564 6 25754278 25756897 Ssu2g2787 2 88691053 88692899 PCT