Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2769 ATGGGAAGCCCCAGCACAACAACCCCCTCCTCTGATTCTGAACTCCCTTGTTCTTATATTCCCGTGCCCGATGGACCCCACTCTCCCGCGGAGCCTCGACGACAGCTGAAGGAGGTGCTTGTCATCTTTTGTGGGTTGCTGGCGCTTGTGTCCTTGGTGGCCTTCAATGGCTACAGGGCGCATTCAAATGGACATGGAGATAATGTGTCATTGCCAACGTCAACACCCAATGAATTAGAATTGAGCCCCGAAACAGAGACAGTAGCTTGGTCAACATGGGAGCCGGTTTCACGTGGCGTGTCTGCAGGGGTCTCCGAGAAGTCCGCCTGGCTATTGACCGCCAACAATATGGGCAACGGGGAATCGTATCCTTGGAACAATAGCATGCTCTCATGGCAGAGAACAGCTTACCATTTCCAGCCTGAGAAGAATTGGATGAACGGTCCATTGTACTACAAAGGGTGGTATCACTTCTTCTACCAGTATAATCCGAACAGTGCAGTCTGGGGTGACATAGTTTGGGGACACGCTGTATCAAGGGACTTGATCCATTGGCTTCACCTTCCACTAGCAATGGTGGCTGATCAATGGTATGACAAAAACGGTGTGTGGACCGGTTCTGCCACCATCTTACCTGATGGTCAAGTCATCATGCTATACACTGGTTCCACCAATGAGTCAGTGCAGGTGCAAAACCTTGCCTACCCTGCTGACCCCTCTGATCCCCTCCTTGTTGATTGGGTCAAATACCCTGCAAATCCTGTTCTGTTCCCACCACCAGGAATTGGTGCCAAGGATTTTCGTGACCCCACCACTGCTTGGCTCACCTCTGAAGGAAAGTGGCGCATCACTATTGGTTCTAAGCTTAACAAAACTGGCATTGCCTTGATTTATGACACCAACGACTTTAAGACCTATGAGCGTGTGGAGGGGGTGCTTCATGCAGTGCCTGGCACTGGCATGTGGGAGTGTGTTGACTTCTTCCCAGTATCCAAAAAGGCAGAAAATGGCTTGGGGACTTCAATTAATGGGGATCATGTGAAGCATGTGGTAAAGGTTAGCTTGGATGATGATAGACATGATTACTATGCACTAGGGAGTTATGATGAGAAGAATGTTAAGTTCACACCAGATGACTTCAAGAACGATGTTGGTATTGGACTCAGATATGACTATGGTATATTTTATGCATCCAAGACATTTTATGATCAGAGTAAGGGGAGGAGAGTGTTGTGGGGTTGGATTGGAGAGTCTGATAGCGAATATGCTGATGTGGCCAAAGGTTGGGCATCAGTTCAGGGTATTCCAAGAGCATTGACACTTGATAAGAAAACTGGTAGCAACTTACTTCAATGGCCTGTAGCAGAGGTGGAAAGTTTGAGATTGAGAAGTGAtgagtttgaaaatttgaaggtgAAGCCAGGATCAGTGGTGCCACTAGAAATTGAAACAGCTGCACAGTTGGACATTGTAGCTGAGTTTGAGATAGATAAGGAAGCCTTGGAGAAAACAACTCAGTCCAATATGGAGTACAAGTGTAGCACCAGTGGTGGAGCAGCTGAACGTGGTGCCTTAGGACCTTTTGGTCTTCTAGTTTTGGCTGATGATGACCTCTCTGAATACACTCCCACATACTTTTATGTCGTCAAAGGAAGCGATGGACAACTTAAAACTTCCTTCTGCTCTGATCAATCAAGgtctTCTCTAGCAACTGATGTTGATAAGAAAATCTTTGGAAGCTTTGTTCCAGTACTAAAAGACGAAAATTTGTCTATAAGGATATTGGTTGACCATTCTATAGTAGAAAGCTTTGCTCAAGGTGGAAGGACGTGCGTGACATCTCGGGTTTATCCAACGAGGGCAATTTATGGAGCTGCTCgattattctttttcaataatGCTACTGAGGCCACCGTGACTGCTTCAATTAAGGTTTGGCAAATGAATTCTGCATTCATACGCCCATTCCACCCCGACcaaaggaattaa 1989 0.4565 MGSPSTTTPSSDSELPCSYIPVPDGPHSPAEPRRQLKEVLVIFCGLLALVSLVAFNGYRAHSNGHGDNVSLPTSTPNELELSPETETVAWSTWEPVSRGVSAGVSEKSAWLLTANNMGNGESYPWNNSMLSWQRTAYHFQPEKNWMNGPLYYKGWYHFFYQYNPNSAVWGDIVWGHAVSRDLIHWLHLPLAMVADQWYDKNGVWTGSATILPDGQVIMLYTGSTNESVQVQNLAYPADPSDPLLVDWVKYPANPVLFPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALIYDTNDFKTYERVEGVLHAVPGTGMWECVDFFPVSKKAENGLGTSINGDHVKHVVKVSLDDDRHDYYALGSYDEKNVKFTPDDFKNDVGIGLRYDYGIFYASKTFYDQSKGRRVLWGWIGESDSEYADVAKGWASVQGIPRALTLDKKTGSNLLQWPVAEVESLRLRSDEFENLKVKPGSVVPLEIETAAQLDIVAEFEIDKEALEKTTQSNMEYKCSTSGGAAERGALGPFGLLVLADDDLSEYTPTYFYVVKGSDGQLKTSFCSDQSRSSLATDVDKKIFGSFVPVLKDENLSIRILVDHSIVESFAQGGRTCVTSRVYPTRAIYGAARLFFFNNATEATVTASIKVWQMNSAFIRPFHPDQRN 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2769 662 CDD GH32_Fruct1-like 144 441 - -
Ssu2g2769 662 SUPERFAMILY Concanavalin A-like lectins/glucanases 453 652 IPR013320 -
Ssu2g2769 662 MobiDBLite consensus disorder prediction 1 15 - -
Ssu2g2769 662 Pfam Glycosyl hydrolases family 32 C terminal 456 647 IPR013189 -
Ssu2g2769 662 Gene3D - 465 648 - -
Ssu2g2769 662 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 33 657 - -
Ssu2g2769 662 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 33 657 - -
Ssu2g2769 662 MobiDBLite consensus disorder prediction 1 31 - -
Ssu2g2769 662 SUPERFAMILY Arabinanase/levansucrase/invertase 131 454 IPR023296 -
Ssu2g2769 662 Pfam Beta-fructofuranosidase, N-terminal domain 18 130 IPR021792 GO:0004564
Ssu2g2769 662 Pfam Glycosyl hydrolases family 32 N-terminal domain 138 453 IPR013148 -
Ssu2g2769 662 SMART glyco_32 138 608 IPR001362 GO:0004553|GO:0005975
Ssu2g2769 662 Gene3D Glycosyl hydrolase domain; family 43 142 464 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2769 Ssu-Chr2 88429933 88436484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2769 1 656 Glycoside Hydrolase AT1G12240 62.426 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2769 K01193 - gmx:100798772 1207.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2769 2 88429933 88436484 Ssu2g2769 2 88429933 88436484 ECH
Ssu2g2769 2 88429933 88436484 Ssu6g1590 6 26257630 26262336 PCT