Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2761 atgcgTGTGAAAGAGATGCACCCGCTGTGCTGTATCTCCCTGGAGAGTCCCGGAATCGGCAACCGTTCACCGGAGCGGGAGGCGGCGCCGTCGCTTTTCCGAACCACGAGTCTACCGGCGGCGGGATCTCACGGCAATGCCGCTCAGGGATCGGAGACCACCGTCGCCGGAGTTATCTACAAGTGGACCAACTACGGCAAAGGCTGGAGATCCCGGTGGTTCCTCTTGCGGAATGGCGTTCTCTCTTACGCCAAGATCCGCTGTCCGGAGAATCTCAACCTCCTCACTCCTTCCGACGACGTTCGCCTCATCGGAGAGATTTCCACCAACCGTCTCGCGCGGATGGACAGCGCCACCACCGTCACGCGACGGAAGCACCGCAAAGCTTCTTCTTCCGGCGTAGTCCATCTCAAGATTTCGTCATTTAGAGAGAGCAAGTCGGATGATCGGCGTTTCTATATATTTACAGCAACGAAAACTCTCCATCTGAGAACTGATTCGAGGAAAGATCGCGTGGCATGGATACAAGCCTTGGTATCAACACGGGGCCTGTATCCTCTTCAACCACTCAATGATCATCTCTTGCTTGCACCCAATGATATATCAGTGTCAACCGAACGGCTTAAGACACGCTTGCTTGAAGAGGGTACCAGTGAGAACCTTGTAAAGGAGTGCGAGCAAATCATGCTCTCAGAGTTCTCCGAAATGCAAGGACAACTTGAAGTTCTTTGTCAAGAGCGATCTAATTTGCTTGATACAATAAGGCAGTTGGAGGCAGCTAATACTGAACCTGAGGCCTCTGCAGTACACGATGGTGAATACCAATTAACAAAGAATGAGTTTTCAAGTCTTGGACGTGGAAAATATAGTGAATGTAGTACTACTGAATCATCGGATGATATTGAGAAACAAGAGATGGAGGAAGtgtctgatgaagatgaaatctCATATTATGATACTAGAGAGTGTTTTACAGAGCCTGATTGCAAGTGTGAGTCAGCAGGAGCTATGAATCAAGTGGACAGGTGTAGGGAAGCCAACACACAATGCACTGATACAGAGAATATTCCTCCTGAGAAAATGGTCTGTAATTATAAGCACCCTCAGATAGCAAGGCGTAAAAAGCTTCCAGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCAATGATCAAGGACAACGTTGGAAAAGATCTCACGAGAGTTTGCCTCCCGGTATACTTCAATGAGCCGATATCATCCTTACAAAAATGTTGTGAGGACTTGGAGTACTCTTATCTTCTGGATCAAGCTTATGAGTACGGAAAATCAGGAAACAGTCTCCTTCGGGCACTGTATGTTGCTGCCTTTGCAGTTTCTGGATATGCGTCATCTGAAGGTCGTAATTGTAAACCCTTTAATCCTTTATTAGGAGAAACCTACGAAGCTGATTACCCCGAGAAAGGAATTCGCTTCTTTTCTGAGAAGGTCAGTCACCATCCAACTCTCATTGCCTGCCACTGCGAAGGTAGAGGATGGAAGTTTTGGGCTGACAGCAACATCCATTCAAAGTTTTGGGGAAGGTCAATTCAGCTTGATCCAGTGGGTGTTCTGACCCTAGAGTTCAATGATGGTGAAATATTTCAGTGGAGCAAGGTCACCACCACGATCTATAATCTTATCCTTGGGAAAATATACTGTGATCATCATGGGAACATGGATATACGTGGTAATCGTAAATATTCATGCAGACTCAAGTTCAAAGAGCAGACGATCCTTGACCGAAATCCTCGCCAGGTGCATGGATTTGTCGAAGATGTATTGGGGAAAAAAGTTGCCACATTATTTGGCAAGTGGGATGACAGCATGTATTATATGAGTGGTAATGTGAATGTCAAGCCTAAAGATTTCACTTCATCAAACGCATCCTTGTTGTGGAAAAGGACTATGCCATCTCCTAATCTCACCCGGTATAATTTAACACCATTTGCCATCACTCTGAATGAGCTTACTCCGGGACTGAAGGAGAAGCTCCCGCCCACGGATTCCAGACTCAGACCAGATCAACGGCATCTAGAGGATGGGGAATACGACAAGGCTAATTTGGAGAAACAAAGGTTGGAAAAGCGGCAGAGAATGTCAAGGAAAATACAGGAAAATGGTTGGAAGCCTAGCTGGTTCCGAAGAGAAGGTGAAAATGGAACATTTCGATACGTTGGTGGGTACTGGGAAGCGAGAGAGCTTGGAAGATGGGACGGGTGCCCTaatatatttggtaaaattaatgaAGACTCTGTCGATCCGTTAGgtgcattttaa 2301 0.4572 MRVKEMHPLCCISLESPGIGNRSPEREAAPSLFRTTSLPAAGSHGNAAQGSETTVAGVIYKWTNYGKGWRSRWFLLRNGVLSYAKIRCPENLNLLTPSDDVRLIGEISTNRLARMDSATTVTRRKHRKASSSGVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALVSTRGLYPLQPLNDHLLLAPNDISVSTERLKTRLLEEGTSENLVKECEQIMLSEFSEMQGQLEVLCQERSNLLDTIRQLEAANTEPEASAVHDGEYQLTKNEFSSLGRGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTRECFTEPDCKCESAGAMNQVDRCREANTQCTDTENIPPEKMVCNYKHPQIARRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCCEDLEYSYLLDQAYEYGKSGNSLLRALYVAAFAVSGYASSEGRNCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPTLIACHCEGRGWKFWADSNIHSKFWGRSIQLDPVGVLTLEFNDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRKYSCRLKFKEQTILDRNPRQVHGFVEDVLGKKVATLFGKWDDSMYYMSGNVNVKPKDFTSSNASLLWKRTMPSPNLTRYNLTPFAITLNELTPGLKEKLPPTDSRLRPDQRHLEDGEYDKANLEKQRLEKRQRMSRKIQENGWKPSWFRREGENGTFRYVGGYWEARELGRWDGCPNIFGKINEDSVDPLGAF 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2761 766 Pfam Oxysterol-binding protein 387 741 IPR000648 GO:0008289
Ssu2g2761 766 Gene3D - 48 183 IPR011993 -
Ssu2g2761 766 Gene3D - 683 740 - -
Ssu2g2761 766 SUPERFAMILY Oxysterol-binding protein-like 382 757 IPR037239 -
Ssu2g2761 766 Coils Coil 693 713 - -
Ssu2g2761 766 Pfam Pleckstrin homology domain 57 178 - -
Ssu2g2761 766 Coils Coil 240 260 - -
Ssu2g2761 766 SUPERFAMILY PH domain-like 51 180 - -
Ssu2g2761 766 ProSiteProfiles PH domain profile. 52 183 IPR001849 -
Ssu2g2761 766 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 757 IPR000648 GO:0008289
Ssu2g2761 766 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 4 757 - -
Ssu2g2761 766 Gene3D - 473 644 - -
Ssu2g2761 766 SMART PH_update 53 185 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2761 Ssu-Chr2 88238703 88248641 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2761 K20456 - gmx:100819924 1503.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2761 2 88238703 88248641 Ssu2g2761 2 88238703 88248641 ECH
Ssu2g2761 2 88238703 88248641 Ssu6g1596 6 26422282 26433429 PCT