Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2760 ATGAGCACCCTCCCTACAACTCTAGGGAAAACTATCCTAGATGCCTCCGACTACAAGGGTCGCCCCGCCGAGAGGTCCAAAACCGGTGGTTGGACTGCTTCCGCCATGATATTAGGAGGAGAAGTGATGGAAAGGTTGACAACACTCGGCATCGCCGTGAATTTGGTGACGTATTTGACGGGGACCATGCATTTGGGTAATGCTGCCTCTGCCAACGTTGTAACCAACTTCTTGGGAACCTCCTTCATGCTCTGTCTCCTCGGTGGCTTTCTCGCCGACACTTTCCTCGGAAGATACCGCACCATCGCCATCTTCGCAGCCGTTCAAGCAACAggtgttacaatattgACGATATCAACCATAGTTCCGAGCCTACGCCCTCCAAAGTGCGCGGGAGACACTGTGCCACCTTGCGTGCGAGCGAATGAGAAGCAGTTATTGGTGCTGTATTTGGCGCTTTATGTAACGGCACTTGGCACCGGCGGTTTGAAATCCAGTGTGTCTGGGTTCGGTTCGGATCAGTTCGATGATTCGGACAACGAAGAGAAGAAGCATATGATTAAGTTCTTCAACTGGTTCTACTTCTTCGTGAGCACGGGGTCTCTGGCCGCGGTGACGGTTCTTGTGTACATACAAGACAACCAAGGACGAGACTGGGGTTATGGTATCTGTGCGGTGGCGATTGTGGCGGCGCTTCTTGTGTTCTTGTCGGGTACGAGGATGTACCGGTTTAAGAAACTGGTGGGAAGTCCACTGACTCAGATTGCGGAAGTGTTTGTGGCTGCTCTGAGGAAGCGGAACTTGGAAGTGCCCTCTGATTCCTCGTTTCTCTATAATGAGTACGACCCCAAGAAGCAGACCCTGCCGCACAGCAAGCAGTTCCGTTTCTTGGACAAAGCTGCAATGATGGAGTCGTCAGAATGCGGTAGTGGAATGAAGAGGAAGTGGTACCTTTGTACCTTAACAGACGTGGAAGAAGTGAAATTGGTTTTAAGAATGCTACCGATATGGGCCACTACCATCATGTTTTGGACCATCCACGCTCAAATGACCACATTCTCAGTGGCACAAGCGACCACCATGGACCGCCACATCGGAAAGACATTTCAAATTCCGGCGGCATCGATGACCGTTTTCTTAATCGGAACAATTCTCCTAACTGTCCCCTTTTACGACCGCTTGATTGTTCCCGTGGCAAGGAAGGTGCTAAAGAACCCAAATGGGTTCACCCCTTTGCAACGCATTGGAGTCGGTTTAGTCCTCTCAGTGGTGGCCATGGTGGCAGGAGCgttaatagaaataaagagactGAGATGCGCGCAATCACATGGTTTGGTAGATAAGCCAGAAGCAAAGATCCCCATGACCGTGTTCTGGTTGATCCCACAGAATTTCTTTGTGGGGTCGGGAGAGGCCTTTATGTATATGGGGCAGCTAGATTTTTTCCTTAGAGAGTGTCCCAAAGGGATGAAAACCATGAGCACGGGATTGTTCTTGAGCACACTTTCCATTGGGTTCTTCTTTAGCTCCTTGTTAGTGTCTATAGTGAACAAAATGACAGCACATGGCAGGCCATGGCTTGCGGATAATCTTAACCAAGGGAGGCTCTATGACTTTTACTGGCTCTTGGCTATACTGAGTGCTATAAATGTGGTGTTATACTTGGTTTGTGCTAAGTGGTACGTGTACAAGGAGAAGAGGCTTGCTGAGGAGGGCATAGAATTGGAAAAAACAGATGATGCTGCTTTCCATGGGCATTGA 1761 0.4884 MSTLPTTLGKTILDASDYKGRPAERSKTGGWTASAMILGGEVMERLTTLGIAVNLVTYLTGTMHLGNAASANVVTNFLGTSFMLCLLGGFLADTFLGRYRTIAIFAAVQATGVTILTISTIVPSLRPPKCAGDTVPPCVRANEKQLLVLYLALYVTALGTGGLKSSVSGFGSDQFDDSDNEEKKHMIKFFNWFYFFVSTGSLAAVTVLVYIQDNQGRDWGYGICAVAIVAALLVFLSGTRMYRFKKLVGSPLTQIAEVFVAALRKRNLEVPSDSSFLYNEYDPKKQTLPHSKQFRFLDKAAMMESSECGSGMKRKWYLCTLTDVEEVKLVLRMLPIWATTIMFWTIHAQMTTFSVAQATTMDRHIGKTFQIPAASMTVFLIGTILLTVPFYDRLIVPVARKVLKNPNGFTPLQRIGVGLVLSVVAMVAGALIEIKRLRCAQSHGLVDKPEAKIPMTVFWLIPQNFFVGSGEAFMYMGQLDFFLRECPKGMKTMSTGLFLSTLSIGFFFSSLLVSIVNKMTAHGRPWLADNLNQGRLYDFYWLLAILSAINVVLYLVCAKWYVYKEKRLAEEGIELEKTDDAAFHGH 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2760 586 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 574 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu2g2760 586 Gene3D MFS general substrate transporter like domains 6 571 IPR036259 -
Ssu2g2760 586 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 574 - -
Ssu2g2760 586 Pfam POT family 99 521 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu2g2760 586 SUPERFAMILY MFS general substrate transporter 22 565 IPR036259 -
Ssu2g2760 586 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2760 Ssu-Chr2 88228241 88232141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2760 3 576 Organic Solute Cotransporters AT1G12110 63.311 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2760 - - gmx:100819392 1068.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2760 2 88228241 88232141 Ssu2g2760 2 88228241 88232141 ECH
Ssu2g2760 2 88228241 88232141 Ssu6g1597 6 26450684 26457622 PCT