Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2757 ATGGCAAGGAGCTACTTCAAACAAGAACATGATCTTGAGAAGAGAAGAGCTGAGGCTGCTAGGATTAGGGAGAAATACCCAGACAGGATTCCGGTAATTGTGGAGAAGGCTGAAAGAAGTGACATCCCAAGTATTGACAAGAAGAAGTACCTTGTCCCTGCTGACTTGACTGTTGGACAGTTTGTCTACGTGATCCGcaaaaggattaaattaagTGCAGAAAAGGCAATCTTCATATTTGTGGACAACGTCCTTCCTCCTACAGGAGCAATTATGTCTGCCATATATGATGAGAAGAAGGACGAGGATGGGTTTCTCTATGTTACATACAGTGGGGAGAACACCTTTGGGGATCTGATTTCCATTCAGTAG 372 0.4247 MARSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFGDLISIQ 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2757 123 SUPERFAMILY Ubiquitin-like 4 117 IPR029071 -
Ssu2g2757 123 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Ssu2g2757 123 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
Ssu2g2757 123 CDD Ubl_ATG8 12 114 - -
Ssu2g2757 123 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Ssu2g2757 123 Gene3D - 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2757 Ssu-Chr2 88177726 88180367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2757 K08341 - gmx:100781703 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2757 2 88177726 88180367 Ssu2g2757 2 88177726 88180367 ECH
Ssu2g2757 2 88177726 88180367 Ssu6g1608 6 26772778 26775893 PCT