Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2754 ATGAGCACCGGCGACCTTCTCAACATCGACCCTCTCGAACTTAAGTTCTTCTTTGAGCTCAAGAAGCAGATCTCGTGTTCTCTTCAATTGTCAAATAAGACCGATAGCTATGTAGCTTTCAAGGTGAAAACAACCAATCCGAAGAAGTATTGTGTTCGTCCAAACACTGGAGTTGTCATGCCACGATCTACGTGTGATGTTATAGTTACCATGCAAGCGCAAAAGGAAGCTCCGGCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAAAGCGTAAAGGCAAATGATGGAACCACCGCAAAGGATATCACTGCAGAAATGTTCAACAAGGAAGCGGGGCACGTGGTTGAGGAGTGCAAATTGAGAGTGGTGTATGTCGCTCCGCCTCAACCTCCGTCTCCGGTCCCAGAAGGTTCCGAGGAAGGGTCGTCACCTAGAGGTTCTGTTTCCGACAATGGCAATGCCAATGGTGCTGATTCCGCGGCTGTAACAAGAGCATTTGCGGAACGACATGAGGGTCCAGAAAAATCTGCAGAGGCAAAAGCTCTTATCTCAAGGCTGACTGAAGAAAAGAGTAATGCAattcaacaaaataacaagCTTCGTCAGGAACTGGACCTGCTGAAACGGGAAAGCCACAAAAGTCGTGGGGGTGTCTCGATGGTCTTTGTCATATTAATTGGTTTACTTGGCATAATTATGGGGTATCTCATGAAGAAGACCTAA 726 0.4559 MSTGDLLNIDPLELKFFFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGVVMPRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKANDGTTAKDITAEMFNKEAGHVVEECKLRVVYVAPPQPPSPVPEGSEEGSSPRGSVSDNGNANGADSAAVTRAFAERHEGPEKSAEAKALISRLTEEKSNAIQQNNKLRQELDLLKRESHKSRGGVSMVFVILIGLLGIIMGYLMKKT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2754 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Ssu2g2754 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Ssu2g2754 241 Coils Coil 177 211 - -
Ssu2g2754 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
Ssu2g2754 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Ssu2g2754 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Ssu2g2754 241 MobiDBLite consensus disorder prediction 143 159 - -
Ssu2g2754 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Ssu2g2754 241 MobiDBLite consensus disorder prediction 130 159 - -
Ssu2g2754 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2754 Ssu-Chr2 88161710 88165155 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2754 - - gmx:100798247 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2754 2 88161710 88165155 Ssu6g1613 6 26839312 26843383 PCT