Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2694 ATGACTGCCTCTCAACTCATATCTGTTAGTCCCGACGAACTCCGCTTCCATTTTGAGTTGGAGAGGCAAACATTTTGCGATCTTAAGGTCCTCAATAACACAGAGAACCATGTTGCTTTCAAGGTCAAAACCACTTCACCAAAGAAATACTTTGTACGACCAAACACCGGTGTTGTACAGCCCTGGGACTCGTGTATCATCAGAGTCACCCTCCAAGCCCAACATGAATACCCTCCAGACATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACAATAGTGAATCCAAATACTGATGTCGATGATCTGCCGCCAGATACTTTTAGTAAGGATAGTGGTAATTCCATAGAGGAGTTGAAATTAAGAGTTGCATATATCTCTCCTACCTCACCTGAAGGAAGCTCTGAAGACGATGCATCAAAGAACTCCTCACAAAAACTTGATACCTCTTCTAGTCAGGCTTTACAGAATCTGAAGGAAGAAAGAGATGCCGCTGCCGGACATACGCGACAGCTGCAACAGGAACTGGACACGCTTAAAAGACGAAGAAACCGAAGAAGTGATCCTGGCTTTTCCTTCACCTTTGCCATTTTTGTGGGTCTCCTTGGAGTTTTACTTGGCTTTCTTTTGAAACTTTTATTCTCTTCACCATCTACAGAATGA 663 0.4314 MTASQLISVSPDELRFHFELERQTFCDLKVLNNTENHVAFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAQHEYPPDMQCKDKFLLQSTIVNPNTDVDDLPPDTFSKDSGNSIEELKLRVAYISPTSPEGSSEDDASKNSSQKLDTSSSQALQNLKEERDAAAGHTRQLQQELDTLKRRRNRRSDPGFSFTFAIFVGLLGVLLGFLLKLLFSSPSTE 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2694 220 PIRSF VAMP_assoc_prot 135 212 IPR016763 GO:0005789
Ssu2g2694 220 PIRSF VAMP_assoc_prot 1 165 IPR016763 GO:0005789
Ssu2g2694 220 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 3 217 IPR016763 GO:0005789
Ssu2g2694 220 Pfam MSP (Major sperm protein) domain 7 107 IPR000535 -
Ssu2g2694 220 MobiDBLite consensus disorder prediction 128 158 - -
Ssu2g2694 220 MobiDBLite consensus disorder prediction 161 183 - -
Ssu2g2694 220 Coils Coil 155 175 - -
Ssu2g2694 220 Gene3D Immunoglobulins 2 130 IPR013783 -
Ssu2g2694 220 MobiDBLite consensus disorder prediction 128 183 - -
Ssu2g2694 220 SUPERFAMILY PapD-like 3 135 IPR008962 -
Ssu2g2694 220 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Ssu2g2694 220 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 3 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2694 Ssu-Chr2 87202762 87206785 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2694 - - gmx:100794270 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g1613 6 26839312 26843383 Ssu2g2694 2 87202762 87206785 PCT