Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2683 ATGCTAGCCACTTGGACCCCAGACCAGGAACTCAACCAAGTGAGGCAAAGGTCAGGTGCAGACATGAAGAGGAACCTCAAATGGTATGATTTGGTAGCTCTTGGACTAGGAGGAATGCTAGGTGTTGGTGTGTTTGTCACAACTGGTTCTGTAGCCCATCATCAATCTGGTCCTTCAGTTTTCATATCCTATATTATAGCTGGACTATCAGCTCTTCTCTCCTCTTTATGTTACACTGAATTTGCTGTCCAAGTCCCAGTAGCAGGAGGAGCTTTCAGTTATTTAAGTTTAACCTTTGGAGAATTTGTGGGATATTTTGCTGGGGCAAATATACTTATGGAGTATGTGTTCTCTAACGCTGCTGTATCAAGGAGTTTCACAGAGTATTTGAGCTTTGCATTTGGAGAAAATGATCCAAACGTGTGGAGAGTGGAAGTGCATGGATTGCCAAAAAACTATAACATGTTGGATTTCCCAGCTGTGTCTCTTATTCTTCTTCTCACTCTCTGCTTGTGTCATAGTACCAAGGAAAGCTCCATGTTGAACCTCATCATGACAGTCTTCCATGTGATTTTCTTTGGATTTATAATTGTTGCTGGTTATTGCAATGGAAGTGCCAAAAACTTAGTGAGTCCAAAAGGACTAGCACCTTTTGGTGTGAGAGGTGTTGTAAATGGAGCAGCTACAGTCTACTTCAGCTATATAGGCTATGACTCGGCTTCAACCTTGGCAGAGGAGATCAAAGATCCTTCTAAGAGCCTCCCTATTGGAATTGTGGGTTCAGTTCTTATAACCACCATACTTTATTGCCTAATGGCTCTATCTTTGTGTATGATGGCTCCTTACAACAAGATATCAGATAAAGCATCATTTTCAATCGCTTTTGGTAAGATTGGATGGATGTGGGAGAGCAATCTTGTTGGGGCAGGTGCAAGTTTGGGCATAGTGGCTTCTCTCTTAGTTGCGATGCTAGGCCAAGCTAGATACCTTTGTGTTATAGGAAGGGCCCGACTAGTGCCGTCTTGGTTAGCCAAAGTGCATCCTTCAACAGGCACCCCATTGAATGCCACACTCTTTTTGGGAGTTTGCACAGCATCCATTGCTCTTTTCACTGAGCTTGACGTTATAATCGAGTTGGTCAACATCGGCACGCTCTTGGTGTTCTACTTGGTGGCTAATGCTCTCGTATACCGTCGATATGTAATCACTAGCCACACCCCACCTTTGTACACTCTCttgttcctatttctcttttcacttAGTGCTATAGGCTTCTCCCTTTCATGGAAATTCAATCAGCAACGGTGGGGTCTCCCACTCTTTGGTGGGCTCATGATCACCATCACAGCTTTTTACCACCACAAGGTGCCTCAAACCCATGCCCAACGTGCTGATGCTGACTGGTGTGTGCCATTCATGCCCTGGCCACCTGCCCTCTCCATCTTTCTCAATGTTTTCCTCATCACCACTCTAAAGCTCCTCTCTTTCCAAAGGTTTGCTATGTGGGCATGTTTCATCACCATCTTCTATGTCCTCTATGGTGTTCACTCCACTTACCACGCGGAAGAATTTGAGATGGGGGCTAATCAAGTGAATTCAAGCTCATCCAACCTACAAACTAAGGTAGAAGTTTAA 1635 0.4385 MLATWTPDQELNQVRQRSGADMKRNLKWYDLVALGLGGMLGVGVFVTTGSVAHHQSGPSVFISYIIAGLSALLSSLCYTEFAVQVPVAGGAFSYLSLTFGEFVGYFAGANILMEYVFSNAAVSRSFTEYLSFAFGENDPNVWRVEVHGLPKNYNMLDFPAVSLILLLTLCLCHSTKESSMLNLIMTVFHVIFFGFIIVAGYCNGSAKNLVSPKGLAPFGVRGVVNGAATVYFSYIGYDSASTLAEEIKDPSKSLPIGIVGSVLITTILYCLMALSLCMMAPYNKISDKASFSIAFGKIGWMWESNLVGAGASLGIVASLLVAMLGQARYLCVIGRARLVPSWLAKVHPSTGTPLNATLFLGVCTASIALFTELDVIIELVNIGTLLVFYLVANALVYRRYVITSHTPPLYTLLFLFLFSLSAIGFSLSWKFNQQRWGLPLFGGLMITITAFYHHKVPQTHAQRADADWCVPFMPWPPALSIFLNVFLITTLKLLSFQRFAMWACFITIFYVLYGVHSTYHAEEFEMGANQVNSSSSNLQTKVEV 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2683 544 PIRSF AA_transporter 4 468 - -
Ssu2g2683 544 PIRSF AA_transporter 466 539 - -
Ssu2g2683 544 PANTHER CATIONIC AMINO ACID TRANSPORTER 7, CHLOROPLASTIC-LIKE 1 529 - -
Ssu2g2683 544 Pfam Amino acid permease 26 425 IPR002293 GO:0016020|GO:0022857|GO:0055085
Ssu2g2683 544 Gene3D Amino acid/polyamine transporter I 21 466 - -
Ssu2g2683 544 Pfam C-terminus of AA_permease 468 517 IPR029485 -
Ssu2g2683 544 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 1 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2683 Ssu-Chr2 87016247 87020491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2683 113 522 Organic Solute Cotransporters AT3G10600 51.064 6.14e-141 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2683 - - gmx:100790787 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2683 2 87016247 87020491 Ssu6g1682 6 28260213 28264949 PCT