Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2652 ATGGCAGACTTACCAGCATATTTACGTGCCTGTTTGAACACTGGGAAGCTTGCCTCCTTGGCAATTTTGGTCTCTGGAGGAATCGTCCTGCAAATTTTGGCATGTGCCTTGTATAATAATTGGTGGCCGATGCTAAGCGTGATAACATATGTGCTTCTTCCAATGCCTTTGCTGTTCTTTGCGGGGTCTGATGGTTCTATATTTTCTGAATCTGATAATAGCTGGGTGAATTTTACCAAGTTCTTGACCGGAGCCTCAACTGTGGGAGGCATTGCCATTCCGAGCATATTAAAGCATGCTGGGGTTATCGGTTGGGGAGCCTTTGCAATGGAACTCTCCTCCTACTTTGTGTTTGCATTAGCCATAGTATGTTTCCTTTGGATGAGCGATGAAGATGATTACGGTATCCTATGA 414 0.4469 MADLPAYLRACLNTGKLASLAILVSGGIVLQILACALYNNWWPMLSVITYVLLPMPLLFFAGSDGSIFSESDNSWVNFTKFLTGASTVGGIAIPSILKHAGVIGWGAFAMELSSYFVFALAIVCFLWMSDEDDYGIL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2652 137 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 134 - -
Ssu2g2652 137 PANTHER LEPTIN RECEPTOR-RELATED 1 134 IPR007262 -
Ssu2g2652 137 Pfam Vacuolar protein sorting 55 18 133 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2652 Ssu-Chr2 86470744 86471508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2652 1 133 EF-hand Containing Proteins AT1G32410 72.388 1.04e-65 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2652 - - gmx:100500037 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2652 2 86470744 86471508 Ssu6g1712 6 28792398 28792829 PCT