Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2645 ATGGCATCCATTCATCTTTCTTCCGCTGCTACGTCTCTCTTCCAGTCCGATCTCTCTCCCTCCAAATATCGAAGGCAACGCATTCCACGCCTCCCTACAACTGCCAGGATAACCAACCACAACGAAGGAACCCCCAACGGCTCTCCTACCGTCGGCAACACAAACTCTTCGGTTGAGGTGCAGTCCGGTAACTGTGCTTTGGAGCACGCAGGGGCGAATTCAGACGCACGTAGGAAAACTAAGATCGTTTGCACGATAGGTCCGTCTACGAGCTCACGTGACATGATATGGAATCTGGCTGAAGCGGGAATGAATGTCGCACGTTTAAACATGTCGCACGGGGACCACGCGTCGCACCTCCAAACCATTGATTTGGTGAAAGAATACAATGCTCAATTTCAAGATAAGGTCATAGCCATCATGCTTGACACCAAGGGTCCTGAGGTTAGAAGTGGGGATGTACCTCGACCAATTTTACTTAAAGAGGGACAAGAATTCTGTTTCACCACTAGGAGAGGGGTTAGCACAGAAGACACGGTTAGCGTGAATTATGATGGTTTTGTGAATGATGTGGAGGTTGGAGATGTGTTGCTGGTTGATGGAGGAATGATGTCTCTTGCTGTTAAGTCGAAGGCAAAAGACTTGGTTAAATGTGAAGTTATTGATGGTGGTGAACTGAAATCAAGGCGTCATTTAAATGTCCGTGGAAAAAGTGCAACTCTTCCTTCCATAACTGACAAGGACTGGGAAGATATCAAGTTTGGGGTGGACAATCAAGTAGACTTCTATGCTGTCTCATTTGTCAAGGATGCTAGAGTGGTTCATGTGTTAAAAGACTAcctcaaaaGTCATAGTGCCGATATACACGTGattgtaaaaattgaaagtgCAGATTCCATACCAAATCTTCTGTCGATACTTTCAGCTTCAGATGGGgCCATGGTTGCTCGTGGGGACCTTGGAGCTGAACTTCCAATAGAGGAAGTTCCTTTATTGCAGgAGGACATTATCAGAAGATGCCACAGTATGCAAAAGCCAGTTATTGTGGCAACAAATATGCTTGAAAGCATGATTAATCATCCCACACCAACAAGGGCAGAAGTCTCAGACATTGCAATTGCAGTAAGACAAGGTGCTGATGCTATCATGCTTTCAGGAGAAACTGCCCATGGAAAATATCCATTGAAAGCTGTTAAAGTTATGCATTCGGTGGCTCTTAGGAATGAATCCAGTGTTCGAAGTGGTGTTGCTTATCCAAGTCACTTGAGTTCACATAAGAGCCATATGGGAGAAATGTTTGCTTTCCATGCGACGACAATGTCTAACACTCTTGATACTCCTATTATTGTTTTCACCAGAACAGGATCCATGGCTATTCTTTTGAGCCATTATCGGCCTTACTCAACAGTCTTTGCATTCACAAATGAAGCAAGGATTAAGCAGAGGTTGACACTTTATCATGGTGTTATGCCCATATACATGCAGTTTTCAAATGATGCAGAGGAGACCTTCTCTAGAGCCCTCAAGCTACTATTGAGCAAGGGTCATTTACATGAGGGACAGCATGTTACTCTGGTTCAAAGTGGAGCACAACCAATCTGGCGTGAGGAATCCACCCACCACATACAAGTTCGCAAGGTTCATGGATAA 1650 0.4418 MASIHLSSAATSLFQSDLSPSKYRRQRIPRLPTTARITNHNEGTPNGSPTVGNTNSSVEVQSGNCALEHAGANSDARRKTKIVCTIGPSTSSRDMIWNLAEAGMNVARLNMSHGDHASHLQTIDLVKEYNAQFQDKVIAIMLDTKGPEVRSGDVPRPILLKEGQEFCFTTRRGVSTEDTVSVNYDGFVNDVEVGDVLLVDGGMMSLAVKSKAKDLVKCEVIDGGELKSRRHLNVRGKSATLPSITDKDWEDIKFGVDNQVDFYAVSFVKDARVVHVLKDYLKSHSADIHVIVKIESADSIPNLLSILSASDGAMVARGDLGAELPIEEVPLLQEDIIRRCHSMQKPVIVATNMLESMINHPTPTRAEVSDIAIAVRQGADAIMLSGETAHGKYPLKAVKVMHSVALRNESSVRSGVAYPSHLSSHKSHMGEMFAFHATTMSNTLDTPIIVFTRTGSMAILLSHYRPYSTVFAFTNEARIKQRLTLYHGVMPIYMQFSNDAEETFSRALKLLLSKGHLHEGQHVTLVQSGAQPIWREESTHHIQVRKVHG 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2645 549 Pfam Pyruvate kinase, barrel domain 78 413 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu2g2645 549 SUPERFAMILY PK C-terminal domain-like 396 547 IPR036918 -
Ssu2g2645 549 MobiDBLite consensus disorder prediction 32 53 - -
Ssu2g2645 549 SUPERFAMILY PK beta-barrel domain-like 147 238 IPR011037 -
Ssu2g2645 549 PRINTS Pyruvate kinase family signature 342 366 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu2g2645 549 PRINTS Pyruvate kinase family signature 290 316 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu2g2645 549 PRINTS Pyruvate kinase family signature 386 402 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu2g2645 549 PRINTS Pyruvate kinase family signature 317 341 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu2g2645 549 PRINTS Pyruvate kinase family signature 367 385 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu2g2645 549 PRINTS Pyruvate kinase family signature 260 274 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu2g2645 549 PRINTS Pyruvate kinase family signature 136 152 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu2g2645 549 PANTHER PLASTIDIAL PYRUVATE KINASE 3, CHLOROPLASTIC 44 547 - -
Ssu2g2645 549 ProSitePatterns Pyruvate kinase active site signature. 288 300 IPR018209 GO:0004743|GO:0006096
Ssu2g2645 549 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 76 411 IPR015813 GO:0003824
Ssu2g2645 549 Pfam Pyruvate kinase, alpha/beta domain 440 527 IPR015795 -
Ssu2g2645 549 PANTHER PYRUVATE KINASE 44 547 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Ssu2g2645 549 MobiDBLite consensus disorder prediction 19 53 - -
Ssu2g2645 549 Gene3D - 78 408 IPR040442 -
Ssu2g2645 549 Gene3D - 409 527 IPR036918 -
Ssu2g2645 549 Gene3D - 147 242 IPR015806 GO:0004743|GO:0006096
Ssu2g2645 549 TIGRFAM pyruv_kin: pyruvate kinase 78 547 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2645 Ssu-Chr2 86383296 86389146 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2645 K00873 - gmx:100776984 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2645 2 86383296 86389146 Ssu7g0542 7 9915281 9920019 PCT