Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2644 ATGTCTTGCATAGAATCTGAGGTCTGCAAAGAGAGAAAGTTCGAAGAAGAATCAGGAGAGATCACTCTTGATGGGAGTGTTGATTTGCATGGCCGTCCTGCAATCAGAGCCAAATCTGGAAGATGGGTTGCTGGAATTATCGTACTCTTGAACCAAGCTCTGGCAACCCTTGCATTCTTTGGGATCGGAGTGAACCTAGTACTGTTCCTGACAAGAGTGGTAGGACAAAATAATGCTGATGCAGCTAACAATGTGAGCAAGTGGACCGGAACTGTTTACATCTTCTCTCTTGTGGGTGCTTTCCTCAGTGATTCTTATTGGGGAAGATACAAAACTTGTGCTGTCTTTCAGGTCATCTTTGTTATAGGTCTAATGTCCTTATCCCTGTCATCATACCTCTTCTTGATTAAGCCTAAAGGTTGTGGGAATGAATCAATTCATTGTGGGAAACATTCAAGATTGGAGATGGGGATGTTCTACCTCTCAATCTATCTCATTGCCTTGGGGAATGGAGGTTATCAACCAAATATTGCTACATTTGGGGCTGATCAGTATGACGAGGAGCACTCAAAGGAAGGTCACTCTAAGGTGGCCTTCTTCAGCTACTTCTACCTAGCTTTTAACATTGGCCAACTCTTCTCAAACACTATTCTGGTCTATTTTGAGGATGAAGGAATATGGGCTCTTGGTTTCTGGCTGTCTGCAGGCTCTGCCTTTGCTGGACTGGTCTTGTTTCTTGCAGGCACCCCAAGGTATAGACACTTCAAGCCTAGTGGCAACCCTCTCTCCAGGTTCTGCCAAGTCCTTGTGGCTGCATCAAGGAAATCCAGTGTTCAGTTGTCATCAAATGGAGAGGATTTGTATGACACGGATACAAAGGAGTCTTCCACCAATGCCAACAGAAAGATTCTCCACACTCACGGGTTCAAGTTCTTGGATAGGGCAGCGTTTATATCTTCAAGAGATCTAGAGGACCAGAAAGGGATCGGTTACAACCCCTGGTGTCTCTGTCCTGTAAGTCAAGTTGAAGAAGTGAAGTGCATACTGAGACTTCTTCCAATTTGGCTCTGCACCATAATATACTCGGTGGTTTTCACACAAATGGCTTCGCTTTTTGTGGAGCAAGGTGCTGCCATGAAAACCACAGTTTCCGATTTCAAAATACCACCAGCTAGCATGTCTAGCTTTGATATCCTCAGTGTggctgttttcattttcttttaccGTCGAGTTCTTGATCCGTTTGTGGGAAAACTTAAAAAGACAGATTCTAAGGGACTTACAGAGCTTCAGAGGATGGGAGTTGGACTTGTTATAGCTGTACTGGCAATGGTTTCGGCTGGAATAGTTGAATGCTATAGGCTTAAGTATGCAAAACAAGGATGCACTCGCTGTGATGGCACGAGCACTTTAAGCATCTTCTGGCAAATCCCTCAGTACGCATTTATAGGAGCTTCTGAGGTTTTCATGTACGTAGGTCAGTTGGAGTTCTTCAATGCTCAGACACCAGACGGCTTAAAGAGCTTTGGAAGTGCACTTTGCATGACATCCATTTCCCTTGGGAACTATGTGAGTAGCTTACTTGTTAGTATGGTTATGAAGATCTCCACCGAGGATCACATGCCAGGGTGGATCCCTGGAAACCTCAATAAAGGTCACTTAGATAGGTTTTACTTCCTCTTAGCTGCCTTGACATCAATAGACTTGATCGCCTATATTGCATGTGCAAAATGGTACAAGTGTATACAGCTAGGCGGGAAACGCGAGAATGATGAGCCAGGAGTATAA 1788 0.439 MSCIESEVCKERKFEEESGEITLDGSVDLHGRPAIRAKSGRWVAGIIVLLNQALATLAFFGIGVNLVLFLTRVVGQNNADAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQVIFVIGLMSLSLSSYLFLIKPKGCGNESIHCGKHSRLEMGMFYLSIYLIALGNGGYQPNIATFGADQYDEEHSKEGHSKVAFFSYFYLAFNIGQLFSNTILVYFEDEGIWALGFWLSAGSAFAGLVLFLAGTPRYRHFKPSGNPLSRFCQVLVAASRKSSVQLSSNGEDLYDTDTKESSTNANRKILHTHGFKFLDRAAFISSRDLEDQKGIGYNPWCLCPVSQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTVSDFKIPPASMSSFDILSVAVFIFFYRRVLDPFVGKLKKTDSKGLTELQRMGVGLVIAVLAMVSAGIVECYRLKYAKQGCTRCDGTSTLSIFWQIPQYAFIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLLVSMVMKISTEDHMPGWIPGNLNKGHLDRFYFLLAALTSIDLIAYIACAKWYKCIQLGGKRENDEPGV 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2644 595 CDD MFS_NPF7 42 578 - -
Ssu2g2644 595 Pfam POT family 110 538 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu2g2644 595 SUPERFAMILY MFS general substrate transporter 33 583 IPR036259 -
Ssu2g2644 595 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 17 588 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu2g2644 595 PANTHER PEPTIDE TRANSPORTER 17 588 - -
Ssu2g2644 595 Gene3D MFS general substrate transporter like domains 13 584 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2644 Ssu-Chr2 86375211 86381752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2644 1 589 Organic Solute Cotransporters AT1G32450 76.639 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2644 K14638 - gmx:100776457 1087.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2644 2 86375211 86381752 Ssu6g1720 6 28961176 28962761 PCT