Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2423 ATGGGGGATATTAGGCAAGGtcaaacaaagattaaaaatgttCCAATTGCTGTCACCCCTGAAGGATTTTGGTGTTGCCCTTCTCCTGTTGGGTTTCCCAAAAGCCTCAAGCCTCAGAACCCTCTGAATAAACTCAAACCCTCTTCATCACCTCCAAAGACTAGTTCCCAGAAAAAGGCAGTCTCAGTGAGTGAGAGAAAAGCAGTGCCTGCCCCATCAAGATTGGTGGTTTCAGATGCTCAGCAATGTAATGATCCTGAAAGACCTCCACCTAGCACTTCTGTGCCTGCACAGAGAGCACCCAGACCCAAACTTGAATCTTTGCCCAAAAAGGTGGCTATTGAGTTTGGTGAACCTGGAACATGTGACATGAAGGTGGTTCTCTTGGGCAAGCAGGGTTTTTGTGTGAAGTTAAGTGTGCACAGGGAGGTTCTAACAGAGAAGAGTAGTTTCTTTGCTGATAAACTTTCTGAACAATCTGGTTTGTCATGTCTCCAAATTGATGACTGGGGGGATGTTGAAATATATGTTGAAACTGTTGGGCTTATGTACTGCAAAGAAATGAAACAGCGGCTAATGAAGCAAAATGTTTCTCGCATTCTTCGAATACTCAAGGTTGCAGAATCCCTTGGATTCAGCTCATGCATCCACGCATGTTTGGAGTACTTGGAGGCAGTCCCTTGGAAcggagaggaagaagaagaaaaggtgaTCTCGACCGTCCTACGACTCCAAGGAGAAGGAATCGGGGTCAATCCGGTGCTAAAACGAGTTTCTCCTGATATTTCGAATGCCCCAAAAGACACACTCTCCCACATTGTTGAACTTGTTCTCAAAAGCAATGAGGAGAGAGGTCGCCGAGAGATGAAATCCATAGTTCTAAAGCTCCTTAGGGAGAACAACAGTCTTCCAAACTCCGCAGGTTCAGCTGACATCTGTAACGACATGATTTATAAGTCATGCAGAAGCTGCGTGGATTCTTTATGGTGTCTGTTCAACCGGGCTGCAGAACCTGGCTTTCCAGACATACCTGGTGATAACAAAGAACATGTAGTAAAACAAATAGCTCTTGAAGCTGATAACTTGTCATGGTTGCTTGAGATTTTGGTTGACAAACAAGCTGCTGAAGCTTTTGCACTGATGTGGGCAAACCAGCAGGAATTGGCAGCCCTACATGGAAAGCTTCCTATTGCATTTCGCTATCATGTCAGCTGCATTTCAGGAAGACTATATGTTGGCATTGGAAGAGGGGAGGTTTTGCCGTCAAAGAACACGCGCCAGTTGTTGTTGCAGACATGGCTACAGCCTCTAATCAATGACTACAACTGGCTGCAGCACGGGTGCAGGTCATTCGATAGGAAACTTGTGGAGGAAGGAATTGGAAGGACAATTCTCACCTTGCCTTTGGAGGATCAACGGAGTATTTTGCTTTCGTGGGTTGGAAGTTTCTTGAAAACTGGTGATGGCTGTCCCAATCTTCAGAGAGCTTTTGAGGTTTGGTGGCGGAGGACTTTCATTAGACCATATGTGGAAGGCCAAGGTAATCCCATGCCAGATAGTTGA 1563 0.4453 MGDIRQGQTKIKNVPIAVTPEGFWCCPSPVGFPKSLKPQNPLNKLKPSSSPPKTSSQKKAVSVSERKAVPAPSRLVVSDAQQCNDPERPPPSTSVPAQRAPRPKLESLPKKVAIEFGEPGTCDMKVVLLGKQGFCVKLSVHREVLTEKSSFFADKLSEQSGLSCLQIDDWGDVEIYVETVGLMYCKEMKQRLMKQNVSRILRILKVAESLGFSSCIHACLEYLEAVPWNGEEEEEKVISTVLRLQGEGIGVNPVLKRVSPDISNAPKDTLSHIVELVLKSNEERGRREMKSIVLKLLRENNSLPNSAGSADICNDMIYKSCRSCVDSLWCLFNRAAEPGFPDIPGDNKEHVVKQIALEADNLSWLLEILVDKQAAEAFALMWANQQELAALHGKLPIAFRYHVSCISGRLYVGIGRGEVLPSKNTRQLLLQTWLQPLINDYNWLQHGCRSFDRKLVEEGIGRTILTLPLEDQRSILLSWVGSFLKTGDGCPNLQRAFEVWWRRTFIRPYVEGQGNPMPDS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2423 520 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 4 515 IPR038920 -
Ssu2g2423 520 PANTHER BTB/POZ DOMAIN PROTEIN 4 515 - -
Ssu2g2423 520 MobiDBLite consensus disorder prediction 35 104 - -
Ssu2g2423 520 MobiDBLite consensus disorder prediction 41 62 - -
Ssu2g2423 520 Gene3D Potassium Channel Kv1.1; Chain A 116 244 IPR011333 -
Ssu2g2423 520 SUPERFAMILY POZ domain 121 224 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2423 Ssu-Chr2 82492136 82495275 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2423 - - gmx:100818853 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2423 2 82492136 82495275 Ssu2g2423 2 82492136 82495275 ECH
Ssu2g2423 2 82492136 82495275 Ssu6g1951 6 35204729 35208676 PCT