Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2407 ATGGGCACTGCTGCACCCAACCATCATTCATTCGCATTAATCCGCCACCTCTTCCATTTGTGTCTCCTCGTTGTCATTTCCACTCATGCCACAGCCGCCACCACTCAACGCTTCAAACAAGCCCCGAAATTCTACAACTCCCCCAGCTGTGCCAGCATTCGGCTCCCACCCACCGACACGTGTTCCGAGGACGCAGTCCACGTGGCCATGACGCTGGACGTCACCTACCTCCGCGGCTCCATGGCCGCCATCCTCTCCGTCCTCCAGCACTCCTCCTGCCCCGAAAGCGTGATCTTCCACTTCGTCACCGCCGCCTCCCCCTCCGCCCTCCTCAACCGCACCCTCGCCAACTCCTTCCCCTACCTCAAATTCCAAATCTACCCCTTCGACGATGCCGCCGTCGCCGGCCTCATCTCCACCTCCATCCGCTCCGCGCTCGACTGCCCCCTCAACTACGCCCGCAACTACCTGGCCAACCTCCTCCCCTCCTGCCTCCGCAGAATCGTCTACCTCGACTCCGACCTCGTTCTCGTCGACGACATCGCCAAACTCGCCGCCACGCCCCTCGGAGCAAACTCCGTCCTCGCCGCGCCCGAGTACTGCAACGCCAACTTCAGCGCGTATTTCACTCCCTCCTTCTGGTCCAACCCCTCGCTGCCCCTCACCTTCGCGGGCCGCAGGCCCTGCTACTTCAACACAGGCGTAATGGTCATTGATTTACAGCGCTGGCGGGCCGGGGACTACACTACCAAGATCCAGGAGTGGATGGAGCTCCAGAAGAGAATGCGGATCTACGAGCTGGGCTCCTTGCCGCCATTCTTGCTCGTCTTCGCCGGGAACATTGGCCCGGTGGATCACAGGTGGAACCAGCACGGGCTCGGCGGGGATAACTTCCGCGGGCTTTGCAGGGACCTGCATCCGGGCCCGGTCAGCCTCCTGCATTGGAGTGGCAAGGGCAAGCCCTGGGCCCGCCTCGACGCCAACCGCCCTTGCCCCTTGGATGCCTTGTGGGCTCCCTACGACCTTCTCGAGACGCCTTTCGCTCTCGAAGCATAG 1056 0.625 MGTAAPNHHSFALIRHLFHLCLLVVISTHATAATTQRFKQAPKFYNSPSCASIRLPPTDTCSEDAVHVAMTLDVTYLRGSMAAILSVLQHSSCPESVIFHFVTAASPSALLNRTLANSFPYLKFQIYPFDDAAVAGLISTSIRSALDCPLNYARNYLANLLPSCLRRIVYLDSDLVLVDDIAKLAATPLGANSVLAAPEYCNANFSAYFTPSFWSNPSLPLTFAGRRPCYFNTGVMVIDLQRWRAGDYTTKIQEWMELQKRMRIYELGSLPPFLLVFAGNIGPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLETPFALEA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2407 351 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 67 330 IPR029044 -
Ssu2g2407 351 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 14 351 - -
Ssu2g2407 351 SUPERFAMILY Nucleotide-diphospho-sugar transferases 66 342 IPR029044 -
Ssu2g2407 351 Pfam Glycosyl transferase family 8 67 324 IPR002495 GO:0016757
Ssu2g2407 351 PANTHER HEXOSYLTRANSFERASE 14 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2407 Ssu-Chr2 81875490 81876545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2407 15 349 Glycosyltransferase AT3G50760 70.710 0.0 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2407 K20893 - gmx:100783054 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2407 2 81875490 81876545 Ssu2g2407 2 81875490 81876545 ECH
Ssu2g2407 2 81875490 81876545 Ssu6g1962 6 35532335 35533537 PCT