Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2354 ATGGCAGGTGCATCAGAAGAGGGACAAGTCATTAGCTGCCACACCGTTGAGGCATGGAACGACCATCTCCAAAAGGGCAATGAATCCAAGAAACTCGTTGTAGTGGATTTTACTGCTTCTTGGTGTGGACCATGCCGTTTCATTGCACCATTCCTGGCTGAGCTGGCTAAGAAGTTTACCAATGTCATATTCCTGAAGGTGGATGTGGACGaattaaagACTGTTGCTCAAGATTGGGCTGTTGAGGCTATGCCCACTTTTGTGTTTGTGAAAGAGGGAACACTTCTGGGCAAAGTGGTGGGAGCAAAGAAGGACGAGCTGCAGCAGACAATAGAGAAACATGTGGCTACAGCTAGTGCTTAA 363 0.4711 MAGASEEGQVISCHTVEAWNDHLQKGNESKKLVVVDFTASWCGPCRFIAPFLAELAKKFTNVIFLKVDVDELKTVAQDWAVEAMPTFVFVKEGTLLGKVVGAKKDELQQTIEKHVATASA 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2354 120 PRINTS Thioredoxin family signature 41 50 - -
Ssu2g2354 120 PRINTS Thioredoxin family signature 33 41 - -
Ssu2g2354 120 PRINTS Thioredoxin family signature 80 91 - -
Ssu2g2354 120 Gene3D Glutaredoxin 2 119 - -
Ssu2g2354 120 Pfam Thioredoxin 12 113 IPR013766 -
Ssu2g2354 120 ProSitePatterns Thioredoxin family active site. 34 52 IPR017937 -
Ssu2g2354 120 SUPERFAMILY Thioredoxin-like 7 116 IPR036249 -
Ssu2g2354 120 ProSiteProfiles Thioredoxin domain profile. 1 116 IPR013766 -
Ssu2g2354 120 PANTHER THIOREDOXIN H-TYPE-LIKE ISOFORM X1 5 119 - -
Ssu2g2354 120 CDD TRX_family 21 112 - -
Ssu2g2354 120 PANTHER THIOREDOXIN 5 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2354 Ssu-Chr2 80929222 80933413 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2354 K03671 - gmx:100499701 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2354 2 80929222 80933413 Ssu9g1840 9 55776305 55778956 PCT