Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2184 ATGAGTGAAGACCTATTTCAGTGCTCTAGAGACATGGTACCATTATCACCTATCAGTTTCCTAAAACGAGTTACCACAACTTATGGTGAAAAGATCTCCATCATTTACAATGATCGTGTGAGATTTTCTTGGAGAGAAACCTATGAAAGATGCGTAAAGCTTGCTTCTGCTTTGGATAAGTTAGGGATTTCTCAGAACaatattgTTGCAGCTTTGGCACCAAATATTCCAGCACTGTACGAGCTTCATTTTGGTGTTCCTATGGCAGGGGCTGTTCTTTCTACGCTCAATACCCAATTGGATGTAACAACATTGGCACTAATATTGGAACAATTACAGCCATGCAAAATCATGTTTGTGGACTACCAGTTAATTGATTCTGCTCTTAAAGCATCTGAAATGCTCTCCCAGAGAAAATGCAAGCCACCCCTCGTTGTCCTAATACCAGATTATGACCAAGAATCACCTTTCCTAGTGAAGGATATCCCACCAGGTACCTTAAACTACAACGAACTTCTTGCAATGGGACAAAAAGATTTTGAGACTTTAAAACCAAGCAATGAAAGCAGTCCCATATCAGTGAACTACACATCAGGCTCCACGGGGATTCTTCCTAAAGGAGTTGTTTATAGTCATAGAGGTGCCTATCTTAATTCCCTTGCAGCAATTGATCGTTTTGACATGAAACAAATGCCAGTGTTCCTATGGACAGTTGACATGTTTCGTTGCAATGGGTGGTGCTTCACTTGGGCAATGTCTGCTCTTGGTGGCACCAATATTTGCCTAAGGAATGTCTCAGCAAAAGGCATATATGATGCAATTCACCTATATAAGGTAACTCATTTTTGTGGTGCACCTACCCTTTTGGACATGATTGCAGATGCATCACCTAGTGACCAGAGGCCTCTGCCTCATAGGGTGAATGTCACAGTTGCTGGTGTGCTACCACCGTTTCAAGTTCTTAACAAGGTGTCACAACTTGGATTTGATGTGAACATTGGATATGGTATGACAGAGACTTTAGGTCCTGCCATTGTAAGACCATGGAAACTTAATTCAGATGATGATCATACAAAGCTGAATTTTGGTGTTTCAGACATTATGCAAGATGTAGTTGATGTGAAAGATCCAGAGACTAATGAAAGTACTCCTCATGATGGGAAAACCATAGGTGAAATTATGTTCAGAGGGGATACTTTGATGCTGGCGTACCTTAATTCACAAGCAACTGAAAAAGCTTTTAGGGGTGGATGGTATAGGACTGGGGACCTTGCTGTTAGACAAATCAATGGATCTATAACATTGAAGGATAGAGCAAAGGATATTATCTATTGTAAGGGAGAGGCTGTGAGCTCACTAGAGGTGGAAGCTGTGTTGGTGAATCATCCAAAGGTTTTGAAAGCAGCTGTGGTGGGGAGATGTGATCACTCACCATGTGCAATTGTCAAATTGAAGGATGGATGTAGTGCCACTGTTGAAGATATCATCAAGTTCTGTGAAGATCAATTGGCTACTCACATGGTGCCTAGGAGTGTGGTCTTTGGAGATTTGCCTGTTAATTCAACTGGGAAGGTACAGAAATTTCGCATCAGGGAGAAGATCAAAAGCAATGAGTGGTATGACTCAATGAAATAG 1635 0.4128 MSEDLFQCSRDMVPLSPISFLKRVTTTYGEKISIIYNDRVRFSWRETYERCVKLASALDKLGISQNNIVAALAPNIPALYELHFGVPMAGAVLSTLNTQLDVTTLALILEQLQPCKIMFVDYQLIDSALKASEMLSQRKCKPPLVVLIPDYDQESPFLVKDIPPGTLNYNELLAMGQKDFETLKPSNESSPISVNYTSGSTGILPKGVVYSHRGAYLNSLAAIDRFDMKQMPVFLWTVDMFRCNGWCFTWAMSALGGTNICLRNVSAKGIYDAIHLYKVTHFCGAPTLLDMIADASPSDQRPLPHRVNVTVAGVLPPFQVLNKVSQLGFDVNIGYGMTETLGPAIVRPWKLNSDDDHTKLNFGVSDIMQDVVDVKDPETNESTPHDGKTIGEIMFRGDTLMLAYLNSQATEKAFRGGWYRTGDLAVRQINGSITLKDRAKDIIYCKGEAVSSLEVEAVLVNHPKVLKAAVVGRCDHSPCAIVKLKDGCSATVEDIIKFCEDQLATHMVPRSVVFGDLPVNSTGKVQKFRIREKIKSNEWYDSMK 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2184 544 Gene3D - 5 439 IPR042099 -
Ssu2g2184 544 Pfam AMP-binding enzyme C-terminal domain 454 524 IPR025110 -
Ssu2g2184 544 PANTHER ACYL-ACTIVATING ENZYME 25 536 - -
Ssu2g2184 544 Gene3D - 440 538 IPR045851 -
Ssu2g2184 544 SUPERFAMILY Acetyl-CoA synthetase-like 12 536 - -
Ssu2g2184 544 Pfam AMP-binding enzyme 23 444 IPR000873 -
Ssu2g2184 544 PANTHER FATTY ACYL-COA SYNTHETASE FAMILY PROTEIN 25 536 - -
Ssu2g2184 544 CDD ttLC_FACS_AEE21_like 13 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2184 Ssu-Chr2 77982436 77990593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2184 79 536 Miscellaneous Gene Families AT1G20560 49.041 3.83e-154 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2184 - - gmx:100819291 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2184 2 77982436 77990593 Ssu2g2184 2 77982436 77990593 ECH
Ssu2g2184 2 77982436 77990593 Ssu5g0782 5 19918725 19967833 PCT