Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2147 ATGGGTTTTCTGGAATTATTGGAGGTGGCGTCTATGCCAATTATTCAAGTCCTACTTATCAGTGCATTGGGAGCTTTGATGGCTACTCAGTATTTCGATAATCTTCTTTCAGCAGACATTCGGAAAGCCTTGAACAAGATTGTCTTCCTTATATTCACTCCTTCGCTTGTATTTGCCAGTTTTGCCAAGAGTGTTTCACTTGAAGATATGATATCATGGTGGTTTATGCCCGTTAACGTTGGACTTACCTTCTTAATTGGAGGGATTATAGGATGGATACTTGTAAAATTACTGAAGCCTAATTTGAAGGTGGAAGGTCTTATTATTGCTGCATGTTCATCAGGAAATATGGGTAACCTTCCTATTGTAATCGTCCCTGCTATCTGTGATGAGAAAGGAGGCCCATTTGGTGCACGTGATGTTTGCCACAATAACGCACTCTCTTATGCATCTTTCTCTATGGCGCTTGGTGGCATCTTCATCTGGACCTACACTTTTCAGACAATAAAAAGCAGATCTATGAAATTTAAGGCACTTGAGGCTGCTGAAATCTTAAAGGTTCGCAACAAAGATCTTGATGCTAATTCAGAAACTTGCCTGCTCAAAGATAAAGATAGTGAAGACACAACAATAGAAGTGCCTCCATCGACTTATATTGGTGACACTGAAAACCAAATTATTGTTGACCAAGATCAGTCCAATGTGAACGAAGTATCGTTTTGGCGTAGAATGGTAGAAGTTCTGAGCCATCTTCTGGCAGAACTAATGTCACCACCAGCAATTGCGtcaTTTCTTGGTTTCCTATTTGGTGCGGTTGCATGGCTAAGGAACATAATAATCGGAGACAATGCTCCACTGCGTGTCATCCAAGACTCTCTTCAATTACTTGGGAATGGGACCATTCCTTGCATCACCCTTTTGCTTGGTGGTAACCTCACTCAAGGATTGAAATCATCAAGTGTCAAACCATTGACCCTCATCAGCATCATCATAGCTCGACTTTTATTACTACCTATTATTGGATTGTTTATTGTCAGAGCAGCAGCAAACTTGGGCTTGCTCCCGGTTGATCCTTTATTTCAGTATGTGCTTGTGATGCAGTATGCCATGCCACCAGCTATGAATATTAGCACCATGGCTCAGCTGTTTGACATAGGAAATGAAGAGTGTTCAGTTATCCTCTTGTGGACATATAGTGCTGCAGCCATAGCACTCACTGCCTGGTCAACATTCCTCCTGTGGGCATTATCTTAA 1254 0.4155 MGFLELLEVASMPIIQVLLISALGALMATQYFDNLLSADIRKALNKIVFLIFTPSLVFASFAKSVSLEDMISWWFMPVNVGLTFLIGGIIGWILVKLLKPNLKVEGLIIAACSSGNMGNLPIVIVPAICDEKGGPFGARDVCHNNALSYASFSMALGGIFIWTYTFQTIKSRSMKFKALEAAEILKVRNKDLDANSETCLLKDKDSEDTTIEVPPSTYIGDTENQIIVDQDQSNVNEVSFWRRMVEVLSHLLAELMSPPAIASFLGFLFGAVAWLRNIIIGDNAPLRVIQDSLQLLGNGTIPCITLLLGGNLTQGLKSSSVKPLTLISIIIARLLLLPIIGLFIVRAAANLGLLPVDPLFQYVLVMQYAMPPAMNISTMAQLFDIGNEECSVILLWTYSAAAIALTAWSTFLLWALS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2147 417 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 416 - -
Ssu2g2147 417 Pfam Membrane transport protein 10 408 IPR004776 GO:0016021|GO:0055085
Ssu2g2147 417 PANTHER - 1 416 IPR045033 GO:0080162
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2147 Ssu-Chr2 77412030 77415897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2147 K24139 - gmx:100792072 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2147 2 77412030 77415897 Ssu2g2147 2 77412030 77415897 ECH
Ssu2g2147 2 77412030 77415897 Ssu5g0818 5 21138773 21142207 PCT