Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2138 ATGAGATTTAGAATTTGCCCTAATCAGAATTGGAAGAAACTCTTTACCAAGGCGCGAAACTTGATCAGTACTGGACACCCTTCCGCCGCCATGGGTGATATTATCCACAAAACCAAAGTCTGCATCATCGGAAGCGGCCCCGCGGCGCACACCGCCGCCGTGTACGCCGCCCGCGCGGAGCTGAAGCCGATCCTCTTCGAGGGCTGGATGGCGAACGACATCGCCCCCGGCGGCCAACTCACGACCACCACCGACGTCGAGAACTTCCCCGGCTTCCCCGACGGCATTCTTGGCGGCGAGCTCATGGAGCGGTGCCGCAAGCAGTCGCAGCGCTTCGGCACCGAGATCCACACCGAGACCGTCTTCAAGGTCGATTTCTCGAACCGTCCTTTTAGGGTTTTCACCGATTCCCGCACTGTCGAGGCCGACGCTGTCGTCGTCGCCACCGGCGCCGTCGCCAAGCGCCTGCCGTTCCCCGGTTCCGGCGACGGCCCCAACGGCTACTGGAACCGTGGGATCTCCGCGTGCGCCGTCTGCGACGGCGCTGCGCCGATTTTCAGGAACAAGCCGCTGGCGGTGATCGGCGGCGGGGACTCGGCGATGGAGGAAGCAACCTTCCTCACTAAGTACGGTTCCGAGGTTTACATAATTCATCGGAGGGATACGTTCAGGGCTTCGAAGATTATGCAGGGCAAGGCGCtgagcaataaaaaaattaaggtgatATGGAATTCGGTGGTGGTTGAGGCTTATGGGGACGGAGATAACAAGAGGGTTCTTGGGGGATTGAAGGTGAAGAATGTGGTGACGCAAGAGGTTTCTGATTTGAAGGTGTCTGGGTTGTTTTTCGCAATTGGGCACGAGCCTGCGACCAAGTTCTTGGACGGGCAGCTTGAACTGGATTCTGATGGGTACGTTGTGACGAAGCCGGGGACTACGAAGACCAGTGTTGAGGGAGTGTTTGCTGCTGGGGATGTTCAGGACAAGAAGTATAGGCAAGCTATTACTGCTGCAGGCACTGGATGCATGGCAGCTTTGGATGCAGAACATTACCTGCAAGGCATTGGTTTACAACAGGATAAGAGTGATTGA 1092 0.5623 MRFRICPNQNWKKLFTKARNLISTGHPSAAMGDIIHKTKVCIIGSGPAAHTAAVYAARAELKPILFEGWMANDIAPGGQLTTTTDVENFPGFPDGILGGELMERCRKQSQRFGTEIHTETVFKVDFSNRPFRVFTDSRTVEADAVVVATGAVAKRLPFPGSGDGPNGYWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEATFLTKYGSEVYIIHRRDTFRASKIMQGKALSNKKIKVIWNSVVVEAYGDGDNKRVLGGLKVKNVVTQEVSDLKVSGLFFAIGHEPATKFLDGQLELDSDGYVVTKPGTTKTSVEGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQGIGLQQDKSD 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2138 363 PRINTS FAD-dependent pyridine nucleotide reductase signature 190 208 - -
Ssu2g2138 363 PRINTS FAD-dependent pyridine nucleotide reductase signature 142 160 - -
Ssu2g2138 363 PRINTS FAD-dependent pyridine nucleotide reductase signature 278 294 - -
Ssu2g2138 363 PRINTS FAD-dependent pyridine nucleotide reductase signature 305 327 - -
Ssu2g2138 363 PRINTS FAD-dependent pyridine nucleotide reductase signature 40 59 - -
Ssu2g2138 363 SUPERFAMILY FAD/NAD(P)-binding domain 32 352 IPR036188 -
Ssu2g2138 363 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 176 198 IPR008255 GO:0016491
Ssu2g2138 363 Gene3D - 42 351 IPR036188 -
Ssu2g2138 363 PANTHER THIOREDOXIN REDUCTASE 36 359 - -
Ssu2g2138 363 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 36 359 - -
Ssu2g2138 363 Pfam Pyridine nucleotide-disulphide oxidoreductase 39 340 IPR023753 GO:0016491
Ssu2g2138 363 PRINTS Pyridine nucleotide disulphide reductase class-II signature 280 301 - -
Ssu2g2138 363 PRINTS Pyridine nucleotide disulphide reductase class-II signature 186 210 - -
Ssu2g2138 363 PRINTS Pyridine nucleotide disulphide reductase class-II signature 39 61 - -
Ssu2g2138 363 PRINTS Pyridine nucleotide disulphide reductase class-II signature 169 181 - -
Ssu2g2138 363 PRINTS Pyridine nucleotide disulphide reductase class-II signature 98 108 - -
Ssu2g2138 363 PRINTS Pyridine nucleotide disulphide reductase class-II signature 143 151 - -
Ssu2g2138 363 PRINTS Pyridine nucleotide disulphide reductase class-II signature 238 254 - -
Ssu2g2138 363 PRINTS Pyridine nucleotide disulphide reductase class-II signature 77 92 - -
Ssu2g2138 363 PRINTS Pyridine nucleotide disulphide reductase class-II signature 315 333 - -
Ssu2g2138 363 Gene3D - 158 290 IPR036188 -
Ssu2g2138 363 TIGRFAM TRX_reduct: thioredoxin-disulfide reductase 39 352 IPR005982 GO:0004791|GO:0005737|GO:0019430
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2138 Ssu-Chr2 77184213 77193946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2138 K00384 - gmx:100790557 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2138 2 77184213 77193946 Ssu2g2138 2 77184213 77193946 ECH
Ssu2g2138 2 77184213 77193946 Ssu5g0840 5 21830110 21832257 PCT