Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2135 ATGGGGCTTGTGGAGCTTTTTGCGGTGGCATCTATGCCGGTGATCAAAGTACTACTAATCACCGCAGTTGGCTTATTTCTTGCACtggaaaatgtaaatttattggGAAAAGATGCAAGGATACAAGTGAATCATCTTGTACATTATGTGTTCAATCCTGCACTGGTGGGTGGCAATTTGGCAGACACGATTACTTTTGAGAATGTTGTTTTATTGTGGTTCATGCCCGTCAATATCCTCCTTACGTTTATAATCGGCTCTGCCTTAGGATGGATCCTTGTCAGATTAACAAGGCCTCCCAAACAATTAGAAGGATTAATATTGGGTGTCTGTTCTGCAGgaaatttaggaaacttgCCTATAATCATTATCCCGGCTATATGTAAAGACAAAGGTAGTCCTTTTGGAGACTCCGATGTCTGCTATCAATATGGAATCGCTTATGCTTCACTTTCTATGGCGGTTGGAGCTGTTTTTATATGGACTTATGTCTACAACATAATGCGAATTTCCGCAAGTATAGTCCCCAAAGAAGATTATAGAACCAGCTCCTTCAAACTGGAGGCTTCAGGAGAGCTACTAGAATTACTCCCAGAGGACGAACCCTCAGAATCCAAAAGTCCAGAAAAGGACAACATGGATGATGCATATACCCTACTGCTTTCTTCACATGAATCTGAGGAGAAAGTGAAGGTACCAATCTCAGCTAAAATCAAGCACCTATTTGGAAACCTTTTACTCAACTCCAGTTTCAGAGCCATATTTTCACCAGCAACTCTTGGAGCGATTGTTGGCTTTATTATTGGCGTAGTACCCCAGATACGTAAATTGATGATTGGCAGCAGTGCTCCACTTCACGTGATTGAAGACTCTACGACCATGCTGGGTGAAGCCGCCATCCCAGTTATAACCCTTATAATGGGTGCAAACCTCCTTAAAGGCTTGAAGGGAGCACGTACTTCGTTTTGGACAATTATTGGAATTATAGCAGTTAGATATATTTTCCTGCCAATTTTGGGCATTCTAGTTATTAAAGGAGCAACACATTTGGGTTTGGTGCAACCAGATCCCTTATATCAATTTATGCTTCTCCTTCAATATGCACTTCCGCCAGCTATGGCTATAGGCACCATCGCCCAGTTGTTTGGAGCTGGTGAAAGTGAATGTTCTGTTATCATGCTATGGACATATGTTTTGGCATCAGTTGCAGTCACTCTCTGGTCAACCTACTTCATGTGGCTTGTAGCTTCGATTTGA 1257 0.4121 MGLVELFAVASMPVIKVLLITAVGLFLALENVNLLGKDARIQVNHLVHYVFNPALVGGNLADTITFENVVLLWFMPVNILLTFIIGSALGWILVRLTRPPKQLEGLILGVCSAGNLGNLPIIIIPAICKDKGSPFGDSDVCYQYGIAYASLSMAVGAVFIWTYVYNIMRISASIVPKEDYRTSSFKLEASGELLELLPEDEPSESKSPEKDNMDDAYTLLLSSHESEEKVKVPISAKIKHLFGNLLLNSSFRAIFSPATLGAIVGFIIGVVPQIRKLMIGSSAPLHVIEDSTTMLGEAAIPVITLIMGANLLKGLKGARTSFWTIIGIIAVRYIFLPILGILVIKGATHLGLVQPDPLYQFMLLLQYALPPAMAIGTIAQLFGAGESECSVIMLWTYVLASVAVTLWSTYFMWLVASI 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2135 418 Pfam Membrane transport protein 10 407 IPR004776 GO:0016021|GO:0055085
Ssu2g2135 418 PANTHER - 1 416 IPR045033 GO:0080162
Ssu2g2135 418 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2135 Ssu-Chr2 77090858 77096608 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2135 K24139 - gmx:100785182 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2135 2 77090858 77096608 Ssu2g2135 2 77090858 77096608 ECH
Ssu2g2135 2 77090858 77096608 Ssu5g0844 5 21949736 21974290 PCT