Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1814 ATGTGTTGGATAGATTTGGTGGGAGACGTGTTTTCCTTGGCAGAATCGAAGTCTAGGAACACACACTTTTGTTTTGTGCATGGAAGAAGACAAGGCCAATGTGAACAAACGCACACGGATTTGTCAATAGAAACAAGGAAGCGAAATTTCTCAAGCATGGGTTTTAGCTTGTGTTTGAGCTCCCCAATCATTTCCACACTTGTACATTTTCTTCTTGTTGCTTCTTTGCTTTGTCCTGTTTGTTCCTCAGAAATGGGCAACACCCCAGTTGCCAATAACACTTTTCGACCGCAAGAAGAGGTTCACAAGTTGAACATCATAAGAACTCGTCTTCAACAGATCAACAAGCCCGCCGTTAAGACAATTCAGAGTCCTGATGGTGATGCAATAGATTGTGTGGTGTCTCATCGGCAACCAGCTTTTGATCATCCTCTATTGAAGGGACACAAACCACTGGATCCTCCAGAAAGGCCTAAAGGTCATAACCAAATGGACATATTGAGTGAGAATTTTCAGTTATGGACCATGTCAGGGGAGTTATGTCCAGAAGGTACAATTCCGATTAGAAGAACAACAGAACAGGATATGTTAAGGGCTAGTTCTGTTAGcaaatttggaagaaaaataagaagacgtGTTAGAAGGGACACCAACAGCAATGGGCATGAGCATGCAGTTGGGTATGTGAGTGGTGATCAGTACTACGGAGCAAAAGCTAGCATAAACGTGTGGGCACCCCACGTGGCAAATCAAGATGAATTCAGCTTGTCCCAAATGTGGGTCATACCTGGTTCATTTGGGGATGATCTCAACACTATTGAAGCTGGTTGGCAGGTCAGCCCGGAGCTCTACGGGGACAGATACCCGAGATTCTTTACTTATTGGACAAGTGATGCATATCAAGCAACTGGATGCTACAATTTACTGTGCTCAGGCTTTGTTCAAACTAACAATAGAATTGCAATTGGAGCTGCAATCTCTCCAACTTCTTCGTATGCCGGTGGACAGTTTGATATTAGCTTGCTCATCTGGAAGGATCCAAAGCACGGGAACTGGTGGCTTGAATTTGGATCAGGAATCTTAGTTGGCTATTGGCCATCATTCTTGTTCACACACCTAAGGGATCATGCAAGCATGGTACAATTTGGTGGAGAAATTGTGAATTCAAGGCAATcagggtctcacacttcaaccCAAATGGGTAGTGGACATTTTGCGGGTGAAGGTTTTGGGAAAGCTTCATATTTTCGGAATTTGCAATTTGTGGATTGGGATAACAACTTGGTACCCTTGTCAAATCTTCGGGTTCTAGCGGATCACCCGAATTGCTATGACATACAGGGAGGGATTAATAATGTTTGGGGGAATTACTTTTACTATGGTGGACCTGGGAGAAATGTGAGATGTCCCTAA 1413 0.4225 MCWIDLVGDVFSLAESKSRNTHFCFVHGRRQGQCEQTHTDLSIETRKRNFSSMGFSLCLSSPIISTLVHFLLVASLLCPVCSSEMGNTPVANNTFRPQEEVHKLNIIRTRLQQINKPAVKTIQSPDGDAIDCVVSHRQPAFDHPLLKGHKPLDPPERPKGHNQMDILSENFQLWTMSGELCPEGTIPIRRTTEQDMLRASSVSKFGRKIRRRVRRDTNSNGHEHAVGYVSGDQYYGAKASINVWAPHVANQDEFSLSQMWVIPGSFGDDLNTIEAGWQVSPELYGDRYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYAGGQFDISLLIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLRDHASMVQFGGEIVNSRQSGSHTSTQMGSGHFAGEGFGKASYFRNLQFVDWDNNLVPLSNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGRNVRCP 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1814 470 Gene3D - 244 359 - -
Ssu2g1814 470 Pfam Neprosin 251 463 IPR004314 -
Ssu2g1814 470 PANTHER - 51 470 - -
Ssu2g1814 470 Pfam Neprosin activation peptide 121 228 IPR025521 -
Ssu2g1814 470 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 51 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1814 Ssu-Chr2 69168708 69172807 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1814 - - gmx:100776639 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1814 2 69168708 69172807 Ssu2g1814 2 69168708 69172807 ECH
Ssu2g1814 2 69168708 69172807 Ssu5g1109 5 35506297 35510072 PCT