Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1805 ATGGCAGCAGAAGAAGCACCCATCCACGGCGATATCTTGGAGGCCATATTCTCGCACGTGCCACTCATCCACCTGGTGCCCGCCTCCCACGTGTCGAAGTCCTGGAATCGCGCGGTGTCCTCCTCCCTCGCCCACGTCAGACCCATCAAGCCGTGGCTCATAGTCCTCACTCAGAAACCCCGCGCCCCGCACGTGACGGCCCTGCACGCCTACGACCCCCGCTCGCACGTGTGGCTCGAAATCAAACACCGCACGTGCCACCCCTCCTCCCCCGTGCGATCCTCCCACTCGAAACTGCTCTTCACGCTCACCCCTTCCGAGTTCGCCTTCTCCCTCGACGCGCTGCACCTCGACTGGCACCGAGCGCCCTCCCCGCGCGTGTGGCGCACCGACCCCGTCGTGGCCTGCGTGGGCCAGCGCGTGGTGGTCGCCGGCGGCGCGTGTGAGTTCGAGGACGACCCGCTGGCGGTGGAGATGTACGACGCGGAGAGCCGCGCGTGGGAGACGTGCCAGTCGATGCCGGCGCTGCTGAAGGGATCCACGGCGTCGTCGTGGCTGTCGGTGGCGGTCGCCGGAGAGATCATGCACGTGACGGAGAAACACTCCGGCGTGACCTACTCCTTCGATACGATGGCGAAAACATGGAAGGGACCGTTTGATTTGAGACCCGACGAGAGCGTTTTCCACTGCGTCACCGGAACCCTAGGGGAGCGGTTGATGGTGGCGGGGGTGGTGGGGGAATTGGGGAACGTGAGGGGCGTGAAGCTGTGGGAGGTTCAGGGGGGATTAGGTTCGGGGATGGAGGAGGTTGGGGAGATGCCGAAGGAGATGGTTCGGAAGGTGTTGGGTGGTTCGGAGCTAGGTTCGATGGAGGTGACGTGGGTTGGGGATTTTGTGTACGTGAGGAACACGGCCAAAGCGGAGGAGTTAGTGGCGTGCGAGGTTGTGAATGGGGTTCGGTGCGAGTGGAGGAGTGTGCGGAACGCCGCCGTGAACTGCGGCGGGAGGATGGTGGTTTGCGGCGGCGATGTCTGCATGGAGGATCTCCAGCGGGCGGTGCTGTCGGAGAATCGGATATTTTGCATGAAACAAGTGTGA 1098 0.6375 MAAEEAPIHGDILEAIFSHVPLIHLVPASHVSKSWNRAVSSSLAHVRPIKPWLIVLTQKPRAPHVTALHAYDPRSHVWLEIKHRTCHPSSPVRSSHSKLLFTLTPSEFAFSLDALHLDWHRAPSPRVWRTDPVVACVGQRVVVAGGACEFEDDPLAVEMYDAESRAWETCQSMPALLKGSTASSWLSVAVAGEIMHVTEKHSGVTYSFDTMAKTWKGPFDLRPDESVFHCVTGTLGERLMVAGVVGELGNVRGVKLWEVQGGLGSGMEEVGEMPKEMVRKVLGGSELGSMEVTWVGDFVYVRNTAKAEELVACEVVNGVRCEWRSVRNAAVNCGGRMVVCGGDVCMEDLQRAVLSENRIFCMKQV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1805 365 SUPERFAMILY F-box domain 11 43 IPR036047 GO:0005515
Ssu2g1805 365 Gene3D - 104 364 IPR015915 GO:0005515
Ssu2g1805 365 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 4 353 - -
Ssu2g1805 365 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 4 353 - -
Ssu2g1805 365 Gene3D - 8 43 - -
Ssu2g1805 365 Pfam F-box domain 11 43 IPR001810 GO:0005515
Ssu2g1805 365 SUPERFAMILY Kelch motif 51 343 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1805 Ssu-Chr2 68900839 68901936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1805 - - gmx:100819427 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1805 2 68900839 68901936 Ssu2g1805 2 68900839 68901936 ECH
Ssu2g1805 2 68900839 68901936 Ssu5g1100 5 34886654 34887814 PCT