Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1773 ATGAACAAACAACTCACGCTCCACTGTCTCTTTATCCTCTTCTTCTCATCTCTCGGTGTGGGTCTCGTCGGCGGCGACGACGCGGCGGCCGGAGAGAAAAACCCGTTCACCCCAAAAGCCTTCGCGATTCGGTATTGGGACAAAGAGATCCGCAGCAACCTCCCGAAGCCACCCTTCCTCGTGTCGAAGGCGTCGCCGCTGAGCGCGGCGGAGGCGGCGTCGTTCGTCAAACTCGCCGCCGGCAACGCTCTCGCCACACGGATGCCGGAATTCTGCGCCGCCGCGAAGCTCCTCTGCTTCCGGGAAGTGGGACCCAGCCTCGAGAAGCACGACAAAGACGCGAACTTCGCAGTGTACAGAGACAAGAACTTCACCAACTACGGAACGGGTCGACCCGGCGGACTCGACTCGTTTAAAAACTACTCCGAGGGGGAGAACATTCCGGTGAACGATTTCCGGCGATACAGCCGCGACTCCGCCGGGCACAAAGACAGATTCGCCAACTACGGCACCGAAGGGAACGTGGTGGACCAGAACTTCCACACCTACGCCGCCGGAGCCACCGGCGGCGCCGGCGAGTTCAAGCACTACGCCGAGGAGACCAACGTCCCGAACCTCGTGTTCGCCTCCTACTCCGACGACGCCAACGGCAGAACCCAGTCGTTCTCCTCCTACTCGGAAAACGGCAATGGCGGCGACCAATCGTTCGCCTCGTACGGCAAAAACGGCAACGCCCCGACCAACCTGTTCTCCTCCTACGGGACAGAGTCCAACGTTGTCGGCACGGGGTTCTCCAACTACGCCGAAACCGCGAACGCCGCGAACGACACCTTCAAAGGCTACGGCGTGGACATGAACAACCCCACCAACACGTTCTCCAACTACGCCGCCGGCGGCAACCGCGCCACGGAGAGATTCTCCAATTACCGCGACAGGTCCAACGTCGGGGCCGACTCCTTCAGCTCGTACGCGAAATCCGCGAACGCCGCCGACGTCGGTTTCGCCACCTACGGCAAGTCCTTCAACGAAGGCACCGACACGTTCGCCTCGTACGCGAAATCCTCCAACGGGGAAACCAAGGTCGGTTTCTCCTCCTACGGCGTGAACAACACCTTCAAGGACTACGCGAAAGAAGGCGTCGCTGTCTCCTTCGCGAAGTACACCAATGTAAGCACGAGCCTGAGCCAGAGCGTGAGTGTCTCCACCGCGAGTGGCAGTTTGGTAAATAAGTGGGTGGAGCCGGGTAAGTTTTTCAGGGAGAAGATGATGAAGGAAGGGACGGTGATGCCCATGCCCGACATAAGGGATAAAATGCCGGAAAGGTCGTTTTTGCCCCGGAGCATTTTGTCGAAATTACCGTTTTCGACCTCGAAGATCGACGAGTTGAAGCGCGTCTTCCGGGCTTCGGATAACGGGTCGATGGAGCGGATGATGCGGGAGTCGTTGGAGGAGTGCGAGCGGGCCCCGAGTCGCGGCGAGACCAAGCGCTGCGTGGGCTCACTCGAGGACATGATCGACTTTGCCACCTCCGTTTTGGGCCGGAACGTCGCCGTTCGGAGCACCCAGAACGTCAACGGGTCCAAGAAGAGTGTGATGGTGGGCCCGGTTACGGGAATCAACGGTGGGAAAGTCACCCAATCCGTGTCTTGCCATCAGAGCCTGTTCCCTTACCTGCTCTATTACTGCCACGCGGTTCCTAAGGTTCGGGTCTACCAAGCGGATCTTCTCGACCCGAAAACCAAGGCTAAGATTAACCACGGTGTTGCCATCTGTCACTTAGACACCTCGGATTGGAGCCCCACCCATGGGGCTTTTCTCTCACTCGGGTCGGGTCCCGGTCGGATCGAGGTTTGTCACTGGATCTTCCAGAACGACATGGCGTGGACCATTGCTGATTGA 1899 0.5919 MNKQLTLHCLFILFFSSLGVGLVGGDDAAAGEKNPFTPKAFAIRYWDKEIRSNLPKPPFLVSKASPLSAAEAASFVKLAAGNALATRMPEFCAAAKLLCFREVGPSLEKHDKDANFAVYRDKNFTNYGTGRPGGLDSFKNYSEGENIPVNDFRRYSRDSAGHKDRFANYGTEGNVVDQNFHTYAAGATGGAGEFKHYAEETNVPNLVFASYSDDANGRTQSFSSYSENGNGGDQSFASYGKNGNAPTNLFSSYGTESNVVGTGFSNYAETANAANDTFKGYGVDMNNPTNTFSNYAAGGNRATERFSNYRDRSNVGADSFSSYAKSANAADVGFATYGKSFNEGTDTFASYAKSSNGETKVGFSSYGVNNTFKDYAKEGVAVSFAKYTNVSTSLSQSVSVSTASGSLVNKWVEPGKFFREKMMKEGTVMPMPDIRDKMPERSFLPRSILSKLPFSTSKIDELKRVFRASDNGSMERMMRESLEECERAPSRGETKRCVGSLEDMIDFATSVLGRNVAVRSTQNVNGSKKSVMVGPVTGINGGKVTQSVSCHQSLFPYLLYYCHAVPKVRVYQADLLDPKTKAKINHGVAICHLDTSDWSPTHGAFLSLGSGPGRIEVCHWIFQNDMAWTIAD 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1773 632 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 9 632 - -
Ssu2g1773 632 SMART BURP_2 415 631 IPR004873 -
Ssu2g1773 632 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 9 632 - -
Ssu2g1773 632 ProSiteProfiles BURP domain profile. 417 631 IPR004873 -
Ssu2g1773 632 MobiDBLite consensus disorder prediction 219 239 - -
Ssu2g1773 632 Pfam BURP domain 417 629 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1773 Ssu-Chr2 68367438 68369440 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1773 - - gmx:100797939 1089.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1773 2 68367438 68369440 Ssu2g1773 2 68367438 68369440 ECH
Ssu2g1773 2 68367438 68369440 Ssu5g1069 5 33663153 33666994 PCT