Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1735 ATGGCAGGAGCTGCACCACCACCCAAGCCGGAAGAGCTTCAGCCACATCCTGTGAAAGATCAACTTCCAAATGTTTCATACTGCATCACAAGTCCTCCTCCTTGGCCGGAGGCTATACTACTTGGTTTCCAACATTACCTGGTGATGCTTGGCACAACTGTTCTAATACCAACCTCTCTTGTTACTCAGATGGGAGGAGGAAACGAAGAGAAAGCAAAAATGATCCAGACTCTGCTGTTTGTAGCTGGCATAAACACATTTTTCCAAACACTATTTGGGACTCGTTTACCAGCAGTTATTGGAGGATCCTACACCTTTGTGCCTACCACCATTTCAATCATTTTGGCTAGTCGCTACAGTGACATTGTGAATCCTCAGGAGAGATTTGAGAGGATAATGCGCGGAACGCAGGGTGCGCTTATTGTTGCTTCAACCCTCCAAATTGTTGTTGGATTCAGTGGCCTTTGGCGCAATGTAGTGAGGTTCTTAAGCCCACTCTCGGCTGTTCCCTTGGTTGCTCTGTCAGGCTTTGGACTTTATGAGTTGGGCTTTCCTGTGCTTGCAAAATGTGTGGAGATTGGGCTGCCAGAAATCATAATCTTACTAGTATTTTCGCAGTACATTCCTCATGTGATGAAAGGAGAAAAGCCTATCTTTGATCGATTTGCAGTTATATTCTCAGTGACAGTTGTGTGGATTTATGCTCATCTTCTCACTGTGGGTGGAGCATATAAAAATGTGCCGCATACAACTCAGGATACGTGCAGAACTGATCGTGCTGGAATTATAAGTGGTGCACCTTGGATTAGAATCCCATATCCTTTCCAATGGGGAGCTCCTACATTTGATGCTGGGGAAGCTTTTGCTACGATGGCTGCTTCATTTGTTGCGCTAGTAGagTCAACAGGTGCTTTTATTGCTGTTTCAAGGTATGCAAGTGCAACTCCATTGCCACCTTCAGTTCTTAGCCGTGGTGTCGGTTGGCAGGGGGTAGGAATTTTGTTATCTGGGATCTTTGGGACAGGGAATGGATCATCAGTTTCTGTAGAGAACGCTGGACTCTTGGCTTTAACACGAGTTGGTAGCCGAAGGGTTGTTCAAATATCAGCAGGTTTCATGATCTTTTTCTCCATACTTGGGAAATTTGGAGCTGTGTTTGCTTCAATCCCAGCACCAATAATTGCAGCATTATATTGCCTTTTCTTTGCCTATGTGGGTTCTGCAGGCCTTAGTTTCCTTCAGTTTTGCAATTTAAACAGCTTTAGAACTAAATTCATCTTGGGAGTCTCTATTTTCATGGGCTTCTCTATACCACAATACTTCAATGAGTACACAGCGTTTAAGAACTATGGTCCTGTGCACACCCATGCTAGATGGTTCAATGACATGATCAATGTCCCATTCTCATCAAAAGCGTTTGTTGCTGGTTCATTAGCAGTGTTCTTGGATGCCACTTTGCACAAGAAAGACAGCCAAACTCGTAAAGACACAGGCATGCACTGGTGGGACAGATTCAGTTCATTCAAGACAGATACAAGGAGTGAGGAGTTTTACTCTCTACCTTTCAATCTAAACAAGTTTTTCCCCTCTGTGTGA 1596 0.4417 MAGAAPPPKPEELQPHPVKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTSLVTQMGGGNEEKAKMIQTLLFVAGINTFFQTLFGTRLPAVIGGSYTFVPTTISIILASRYSDIVNPQERFERIMRGTQGALIVASTLQIVVGFSGLWRNVVRFLSPLSAVPLVALSGFGLYELGFPVLAKCVEIGLPEIIILLVFSQYIPHVMKGEKPIFDRFAVIFSVTVVWIYAHLLTVGGAYKNVPHTTQDTCRTDRAGIISGAPWIRIPYPFQWGAPTFDAGEAFATMAASFVALVESTGAFIAVSRYASATPLPPSVLSRGVGWQGVGILLSGIFGTGNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYVGSAGLSFLQFCNLNSFRTKFILGVSIFMGFSIPQYFNEYTAFKNYGPVHTHARWFNDMINVPFSSKAFVAGSLAVFLDATLHKKDSQTRKDTGMHWWDRFSSFKTDTRSEEFYSLPFNLNKFFPSV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1735 531 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 2 531 - -
Ssu2g1735 531 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 2 531 - -
Ssu2g1735 531 Pfam Permease family 37 441 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1735 Ssu-Chr2 67489947 67494008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1735 5 531 Organic Solute Cotransporters AT1G60030 82.163 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1735 - - gmx:100814601 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1735 2 67489947 67494008 Ssu2g1735 2 67489947 67494008 ECH
Ssu2g1735 2 67489947 67494008 Ssu5g1030 5 32614212 32618637 PCT