Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1672 atgaagaggggTAGCAAACTAGACCCGTTTGCGCTACCCAACAGGCTCACACTGCTTCAAATTTTCATGGCGGTGATGCTCGTGTATCTGCTCTTCATGAGCTTCGAAATCCCTCTCGCCTTCCGAGCCGGGTCCGGTTCCGAAAACGGCGCCGTTTTCCTCACCGACGCGTTTCCCGTGCCCGTGCCGCTCTTGCTCGAGGAACCGAACCGGAGGCTCGAAATTCGAGGACCCAGGGGGTTGAAGCTGGAGAAAGTCTCCACCTTGAGGTTCAACGGGAGCTTCTCGGAGGGTTCGGAGCTGCACAAGGTGGCGCGGCACGCGTGGGTCGCGGGGGAGAAGCTGTGGGGGGAGGTGGAGAGTGGGAAAGTGAAGGGTTTTGCCGCTAAGTTTAAGGTTGTCGAGAACGGGTCGGACGCGTGTCCGAATTCGGTTTCGGTGTCGGGGGCGGAGTTCCGGGAGCGGTTCAAGGGGGTGATGGTGCTGCCGTGCGGGCTGACACTGTGGTCGCACGTGACGGTGGTGGGGACGCCGCGGTGGGCGCACGCGGAGAGGGACCCTAAGATAGCGGTGGTGAGGGACGGGGACGAGGCGGTGATGGTGTCGCAGTTCATGATGGAGCTGCAGGGGCTGAAGGCCGTGGACAAGGAGGAGCCGCCGCGGATTCTGCATTTTAATCCGAGGCTGAGAGGGGATTGGAGCGGGACGCCCGTCATTGAGCAAAACACTTGCTATAGGATGCAGTGGGGCTCTGCTCTCCGGTGTGAGGGGTGGAAGTCCCGCGCCGATGAGGAAACTGTTGATGGACACGTGAAATGTGAAAAGTGGATTCGTGATGACAATAATCGTTCTGAAGAGTGGAAGGCGACGTGGTGGTTAAACAGATTGATAGGGCGGAAAAAGAAGGTGGCTGTAGACTGGCCATATCCTTTTGCAGAGGGTAAGCTATTTGTTCTCACCATAAGTGCTGGCTTGGAAGGTTACCATATTAGTGTGGACGGGAGGCACGTTACATCCTTTCCCTATCGCACGGGATTTGCTCTTGAGGATGCTACGGGACTATTCATAAATGGGGATGTTGATGTGCACTCTATATTTGCTGCTTCCTTACCTACATCACATCCTAGCTTTGCTCCACAGATGCATCTTGAATTGCTTCCTCGGTGGAAAGCTCCTCCTCTTCACAATGTGAATGTGGAGCTTTTCATTGGTATCCTTTCTGCTGGAAACCATTTTGCTGAACGGATGGCAGTGAGGAAGTCCTGGATGCAGCATAAGCTAATCAAATCGTCACATGTTGTGGCTCGATTTTTTGTAGCCTTGCATGCAAGGAAGGATATGAATGTGGACATGAAGAAAGAAGCAGAGTATTTTGGTGATATTATTATAGTCCCGTACATGGATCATTATGACCTCGTTGTGTTGAAGACCATAGCTATCTGTGAATATGGGATTCGTACAGTGGCTGCTAAGCATATCATGAAGTGTGATGATGACACATTTGTCAGAGTGGATTCTATCATAAATGAAGCAAGACAAGTTCAAAGTGATAGAAGTCTCTACATGGGAAATATGAATTACCACCATAGGCCTCTTCGCCATGGGAAATGGGCTGTAACTTATGAGGAATGGGTAGAGGAAGAGTATCCTATCTATGCCAATGGTCCAGGTTACATAATCTCAGCTGACATTGCTCAGTTCATTGTATCTGAATTTGAGAAGCGCAGATTAAAATTATTCAAAATGGAAGACGTGAGCATGGGAATGTGGGTGGAACAGTTCAACAGCTCAAGACCAGTAGAGTATGTGCACAACTTGAAGTTCTGCCAATTTGGGTGCATTGAAGAGTACTACACTGCACATTACCAATCACCACGACAAATGACATGCATGTGGGAAAAATTGCAACATCAAGGAAAACCACTCTGTTGTAACATGAGATGA 1944 0.501 MKRGSKLDPFALPNRLTLLQIFMAVMLVYLLFMSFEIPLAFRAGSGSENGAVFLTDAFPVPVPLLLEEPNRRLEIRGPRGLKLEKVSTLRFNGSFSEGSELHKVARHAWVAGEKLWGEVESGKVKGFAAKFKVVENGSDACPNSVSVSGAEFRERFKGVMVLPCGLTLWSHVTVVGTPRWAHAERDPKIAVVRDGDEAVMVSQFMMELQGLKAVDKEEPPRILHFNPRLRGDWSGTPVIEQNTCYRMQWGSALRCEGWKSRADEETVDGHVKCEKWIRDDNNRSEEWKATWWLNRLIGRKKKVAVDWPYPFAEGKLFVLTISAGLEGYHISVDGRHVTSFPYRTGFALEDATGLFINGDVDVHSIFAASLPTSHPSFAPQMHLELLPRWKAPPLHNVNVELFIGILSAGNHFAERMAVRKSWMQHKLIKSSHVVARFFVALHARKDMNVDMKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIRTVAAKHIMKCDDDTFVRVDSIINEARQVQSDRSLYMGNMNYHHRPLRHGKWAVTYEEWVEEEYPIYANGPGYIISADIAQFIVSEFEKRRLKLFKMEDVSMGMWVEQFNSSRPVEYVHNLKFCQFGCIEEYYTAHYQSPRQMTCMWEKLQHQGKPLCCNMR 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1672 647 Pfam Galactoside-binding lectin 159 366 IPR001079 GO:0030246
Ssu2g1672 647 SUPERFAMILY Concanavalin A-like lectins/glucanases 160 366 IPR013320 -
Ssu2g1672 647 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 11 647 - -
Ssu2g1672 647 SMART Gal_bind_lectin_2 162 367 IPR001079 GO:0030246
Ssu2g1672 647 Gene3D - 151 366 - -
Ssu2g1672 647 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 11 647 IPR002659 GO:0006486|GO:0016020|GO:0016758
Ssu2g1672 647 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 158 368 IPR001079 GO:0030246
Ssu2g1672 647 Pfam Galactosyltransferase 414 594 IPR002659 GO:0006486|GO:0016020|GO:0016758
Ssu2g1672 647 Gene3D - 392 640 - -
Ssu2g1672 647 CDD GLECT 162 366 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1672 Ssu-Chr2 65773029 65779755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1672 1 647 Glycosyltransferase AT1G74800 60.593 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1672 K20843 - gmx:100803219 1204.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1672 2 65773029 65779755 Ssu2g1672 2 65773029 65779755 ECH
Ssu2g1672 2 65773029 65779755 Ssu6g0206 6 3224715 3225927 PCT