Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1668 ATGGAGTTCTTCACGAAAACGAACGTGGTGAAGCTGCGCAGCCACCTGGACAAGTACCTCGTGGCGGACGACGACGGCGAGCGGGTCCGCCAGAGCCGGAAGGGCTCCGGCCGAGGAGCGCGGTGGACGGTGGAGGAATCGGAAGGGAACAAGGTGCGGCTGAGGAGCTGCAACGGGAGGCACCTAACGGCGACGGAAACGCCGTTCCTGCTAGGCATGACGGGGAAAGCGGTGCTCCAAACGGAGTTCGAGGCGGACGCGGATTTCAAATACGAGTGGGAAGTGATACGCGACGGGTTTCAGGTGAGGTTGAGGAGTTGGAACGGGAAGTTCCTGAGGGCGAACGGGGGGACGCCGCCGTGGAGGAACTCCGTGACGCACGACGAGCCGCACAGCTCGGCCACGCGGGATTGGGTGCTGTGGGACGTGGAGGCGGTGGAGGAGGCCGCGGACGAGTTCTCCGAGAGCGCCGTTTCGTCTTTTGCCTCCGATGAGCTTTCGGTGGATTCCGAACCGGCGTCGCCGATGTCGGTTTTCTCGCTCAGGTCGCCGCCGGCGCGGCGGAACTCCAAGCTGCTGATACAGACAATAAGTTCGAACAAGTTCAGAACCGGCATGGACTTCTTCCACCGCGCGAAGGCGGTGCGGCTCCGGAGCCACCACGACAAGTACTTGTCAGCGGAGGAGGACGAGGAGTCGGTGACGCAAGACCGAAAAGGGTCCTCGAAGAGCGCGCGGTGGCTGGTGGAGTACGTGCCGGAGTACGACAACATAATTCGCCTGAAGAGCTGTCACGGCAAGTACCTCACCGCGTCCGACCACCTCTTTCTGCTGGGCATGACGGGCCGCAAGGTCCTCCAGACGCTCCCGCCGCGGCTCGACTCCTCCGTCGAGTGGGAGCCCGTCAGGGACGGCGGGCGCGTGAAGCTCAGGACCCGTTACGGGAACTTCCTGAGAGCCAATGGCGGGTTGCCCCCGTGGAGGAACTCCGTCACGCACGATATTCCGCACAGGACCGTCACGCAGGATTGGATCCTCTGGGACGTTGATGTCGTCGAGATTTATGTGGACTCGCCGGTTCATAACAAGCCCTCTGCTCCACCCTTGCCTGTTTCGGGTGACGTTCCCAACCTAGCCAGCGCGCCGTTGCCGCCGCCGCCAACCGTGTCTGCTAGCTTTTCAAAGCAACAGTCGAATGGTTCGCCGAAGCTGGAGGGGCGAACTATATACTACCATATTGCTGAAGACAATGGAGAGGTGCTGGATGAAGGTATGCAGGGgtattctttgattttcaaaGGGAATGGAGTTGAAGAATTGACTCGAAAGTTTGAGGAAGAGACAGGGCTAGAGGGAATCATTGTGTGTAATCGGAGTCCTTTGAATAGAAAGCTTTATCCTCTTCACTTGCAGCTTCCTCCAAACAATGTGACCATGCATGTTGTTTTGGTTCTTCCCATGTCAAAAGgtgagttttctttttcttttttattcctccTTGTTGAATCTCTTTCTTCTGGATGCTCACATGCTTAG 1536 0.5736 MEFFTKTNVVKLRSHLDKYLVADDDGERVRQSRKGSGRGARWTVEESEGNKVRLRSCNGRHLTATETPFLLGMTGKAVLQTEFEADADFKYEWEVIRDGFQVRLRSWNGKFLRANGGTPPWRNSVTHDEPHSSATRDWVLWDVEAVEEAADEFSESAVSSFASDELSVDSEPASPMSVFSLRSPPARRNSKLLIQTISSNKFRTGMDFFHRAKAVRLRSHHDKYLSAEEDEESVTQDRKGSSKSARWLVEYVPEYDNIIRLKSCHGKYLTASDHLFLLGMTGRKVLQTLPPRLDSSVEWEPVRDGGRVKLRTRYGNFLRANGGLPPWRNSVTHDIPHRTVTQDWILWDVDVVEIYVDSPVHNKPSAPPLPVSGDVPNLASAPLPPPPTVSASFSKQQSNGSPKLEGRTIYYHIAEDNGEVLDEGMQGYSLIFKGNGVEELTRKFEEETGLEGIIVCNRSPLNRKLYPLHLQLPPNNVTMHVVLVLPMSKGEFSFSFLFLLVESLSSGCSHA 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1668 511 MobiDBLite consensus disorder prediction 367 402 - -
Ssu2g1668 511 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 199 489 - -
Ssu2g1668 511 SUPERFAMILY Actin-crosslinking proteins 210 352 IPR008999 -
Ssu2g1668 511 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 1 189 - -
Ssu2g1668 511 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 199 489 - -
Ssu2g1668 511 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 189 - -
Ssu2g1668 511 Gene3D - 214 332 - -
Ssu2g1668 511 Gene3D - 9 149 - -
Ssu2g1668 511 SUPERFAMILY Actin-crosslinking proteins 8 144 IPR008999 -
Ssu2g1668 511 Pfam Domain of unknown function (DUF569) 1 141 IPR007679 -
Ssu2g1668 511 Pfam Domain of unknown function (DUF569) 206 347 IPR007679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1668 Ssu-Chr2 65683589 65691034 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g1668 - - gmx:100811752 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1668 2 65683589 65691034 Ssu2g1668 2 65683589 65691034 ECH
Ssu2g1668 2 65683589 65691034 Ssu5g1213 5 39799099 39806748 PCT