Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0921 ATGGGGAATTGTTTGCATAAGCCTAAGGATGACGATTCTGATCATAATGAGGAGTTTGCTCCTGGGAATGTGCAACTTATTACTACCAAAGAATCTTGGGACCAAAAGTTGGAACAAGCGAGGAGGGACAgtaaaattGTTATTGCAAATTTCAGTGCAACATGGTGTGGTCCTTGTAAGACAATTGCACCATACTATAGCGAGTTGTCCGAGAAATACCCGTCTATCATGTTCTTGTTAATCGATGTGGATGAACTAACTGACTTCAGCACTTCGTGGGACATCAAAGCCACACCaactttcttctttcttaaagATGGAAAAGAGGTTGACAAACTTGTAGGAGCCAACAAGCCAGAGCTGGAGAAGAAGATTGCTGCGGTTACTGATGTAGTGCCTCATAATCAATAg 411 0.4015 MGNCLHKPKDDDSDHNEEFAPGNVQLITTKESWDQKLEQARRDSKIVIANFSATWCGPCKTIAPYYSELSEKYPSIMFLLIDVDELTDFSTSWDIKATPTFFFLKDGKEVDKLVGANKPELEKKIAAVTDVVPHNQ 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0921 136 Pfam Thioredoxin 27 126 IPR013766 -
Ssu2g0921 136 Gene3D Glutaredoxin 1 134 - -
Ssu2g0921 136 ProSitePatterns Thioredoxin family active site. 48 66 IPR017937 -
Ssu2g0921 136 ProSiteProfiles Thioredoxin domain profile. 6 130 IPR013766 -
Ssu2g0921 136 PRINTS Thioredoxin family signature 55 64 - -
Ssu2g0921 136 PRINTS Thioredoxin family signature 94 105 - -
Ssu2g0921 136 PRINTS Thioredoxin family signature 47 55 - -
Ssu2g0921 136 PANTHER THIOREDOXIN 6 134 - -
Ssu2g0921 136 PANTHER THIOREDOXIN H9 6 134 - -
Ssu2g0921 136 CDD TRX_family 31 126 - -
Ssu2g0921 136 SUPERFAMILY Thioredoxin-like 19 128 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0921 Ssu-Chr2 46106782 46110630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0921 K03671 - gmx:100527258 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0934 3 22272949 22275924 Ssu2g0921 2 46106782 46110630 PCT