Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0844 ATGGGTTGCACGGCGTCGAAACTCGACATCGAGGAAACCGTGAGGCGGTGCAAGGAGCGCCGCCGCCTGATGAAGGACGCGGTCTACGCGCGCCACCACCTCGCGGCGGCGCACTCCGATTATTGCCGCTGCCTCCGCCTCACCGGCGCCGCACTCTATACCTTCGCCGCCAGGGAACCCCTCGCCGTCGCCGACGACACTCCCGCCGTCCTCCTCAACCCCACCGCCACCGCTAATCCCCAACCACCACCACATCCTCCTCCTCCCGCCGCCGCAACAAGCCCCAAACTCCCTCGTATTATAACTTCCTCCGCCGTCACGCGCCGCCGTAAGCCACCGCCGAAGCTCCCTCACATTCTCTCCGAATCGAGCCTCTGTTCCTCGCCGGGAAGCGAATATTCGAATTTCTTTGCAACTGCGCAACAAGTTCAATCCACACCTACTTCGCAACCACCACATCCCCCTCCTTCCGCCGCCACGCGCCGCCGCAAACCGCCGCCGAAGCTCCCTCACTATTCTCTCCGAATCGAGCCTCTGTTCCTCGCCGCGAAGAGAATACTCGAATTTCTTCGCCACCGCGCAGCAAGCTCAATTCACGCCTACTTCGCAAACCTCTTCGGTTTGGAATTGGGAGAATCTCCGTCCTCCTCCGACTCCTCCAGGCTCCGATTACTTCCGCCAGCATCAAAACCACAAATCGAAGACACCGAATTTCGAAACGTCAGAATCCGAATCTGA 738 0.6043 MGCTASKLDIEETVRRCKERRRLMKDAVYARHHLAAAHSDYCRCLRLTGAALYTFAAREPLAVADDTPAVLLNPTATANPQPPPHPPPPAAATSPKLPRIITSSAVTRRRKPPPKLPHILSESSLCSSPGSEYSNFFATAQQVQSTPTSQPPHPPPSAATRRRKPPPKLPHYSLRIEPLFLAAKRILEFLRHRAASSIHAYFANLFGLELGESPSSSDSSRLRLLPPASKPQIEDTEFRNVRIRI 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0844 245 MobiDBLite consensus disorder prediction 103 122 - -
Ssu2g0844 245 PANTHER UNCHARACTERIZED 1 179 - -
Ssu2g0844 245 MobiDBLite consensus disorder prediction 141 170 - -
Ssu2g0844 245 MobiDBLite consensus disorder prediction 148 163 - -
Ssu2g0844 245 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Ssu2g0844 245 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 1 179 - -
Ssu2g0844 245 MobiDBLite consensus disorder prediction 77 94 - -
Ssu2g0844 245 MobiDBLite consensus disorder prediction 72 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0844 Ssu-Chr2 43533478 43534215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0844 1 59 Acyl Lipid Metabolism Gene Families AT2G27090 37.288 1.45e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0844 - - gmx:100792843 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0844 2 43533478 43534215 Ssu2g0844 2 43533478 43534215 ECH
Ssu2g0844 2 43533478 43534215 Ssu3g0530 3 13056101 13061649 PCT