Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0765 ATGGAGAAAACAACACACATTGCAGTAATTCCTGGTTTAGGGTTCAGCCATTTAGTTCCCATTCTTCAGTTCTCCAAGCGACTTGTTGAGCTCCATCCAGATATTCATGTCACTTGCATCGTTCCCTCACTTGGGTCTCTCCCAAGTGCCTCAAAAGCCATCCTCGAAAATCTTCCACCAAACATCAACCCCATGTTTCTTCCACCGGTGAACGTCAAGGACCTACCACAAGGGATTCCCTTACTAGTCCAAATTCATCTCACAATGAGTCACTCTATGCCATCTATACATGAGGCCTTGACGTCCTTAACTTCAGAAACTACCCTTGTGGCCATGGTGGTTGATTGTTTTGCCTTTGAAGCACTAGATTTTGCTCACGAGTTCAACATGTTGTCCTATGTTCACTTCCCTGCCGCAGCTACCACACTGTCTGCGCTCTTGCATTTGCCCAAGTTGGACGAGGAAACCTCATGTGAGTACAGAGATCTGCCACATCCTATCAAATTACCAGGTTGTGTACCATTTCATGGCCGGGATTTCTATTCCCCAGCTCAGGATAGGACTAGTCTAGTTTACAAATTCTTACTCCAACGTGTTAGACGTATTCGTTGTGTTGATGGGATCTTCATTAATAGCTTCTTAGAAATGGAAACAGGTCCTATAACAGGATTGAAAGAGGAGGGAATCGGGTACCCTCCTGTGTATCCTGTTGGACCAATTGTCCAAACTGGGATAGGGTCTGGTGATGTTGCAAATGGGTTGGAGTGTCTAACATGGTTGGACAAACAGCAAGTGGGTTCTGTTTTGTATGTTTCTTTTGGGAGTGGTGGAACATTGTCACAAGAACAAATGATTGAGTTGGCTTATGGTTTGGAATTGAGTAATCATAAGTTCTTGTGGGTTGTGAGAGCACCAAATAATACAACAACGGATGCTGCTTATCTTGGTGCACAGAAGTATGTTGACCCTTTACAGTTCTTAGCAGATGGGTTTTTGGAGAGAACCAAAGAGCAAGGTATGGTTATTCCTTCATGGGCACCTCAGATTCAAGTCCTTAGTCACAGTTCAGTTGGTGGGTTCTTGACTCACTGTGGCTGGAATTCGTTCCTTGAGAGTGTGCTACACGGTGTGCCACTCATCACATGGCCTCTGTTTGCAGAGCAACAAATGAATGCGGTTATGCTAAGTGATGGCCTCAAAGTGGGAGTGAGGCCAAGAGTTAATGAAAATGGCTTGGTGGAAAGGGTAGAAATTGTTGAGGTGATCAAGTGTCTAATGGAAGGGGAAGAAGGTGGGAAAATGCGCAGAGGAATGAAGGAGTTAAAAGAAGCTGCTATGAATGCACTCAAACAAGATGGGTCTTCTACGAAGAGCCTTTCTCAGTTAGCACTAAAGTGGAAAAATTTGGCATAG 1413 0.4452 MEKTTHIAVIPGLGFSHLVPILQFSKRLVELHPDIHVTCIVPSLGSLPSASKAILENLPPNINPMFLPPVNVKDLPQGIPLLVQIHLTMSHSMPSIHEALTSLTSETTLVAMVVDCFAFEALDFAHEFNMLSYVHFPAAATTLSALLHLPKLDEETSCEYRDLPHPIKLPGCVPFHGRDFYSPAQDRTSLVYKFLLQRVRRIRCVDGIFINSFLEMETGPITGLKEEGIGYPPVYPVGPIVQTGIGSGDVANGLECLTWLDKQQVGSVLYVSFGSGGTLSQEQMIELAYGLELSNHKFLWVVRAPNNTTTDAAYLGAQKYVDPLQFLADGFLERTKEQGMVIPSWAPQIQVLSHSSVGGFLTHCGWNSFLESVLHGVPLITWPLFAEQQMNAVMLSDGLKVGVRPRVNENGLVERVEIVEVIKCLMEGEEGGKMRRGMKELKEAAMNALKQDGSSTKSLSQLALKWKNLA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0765 470 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 253 395 IPR002213 GO:0008194
Ssu2g0765 470 Gene3D Glycogen Phosphorylase B; 6 455 - -
Ssu2g0765 470 Gene3D Glycogen Phosphorylase B; 249 450 - -
Ssu2g0765 470 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 462 - -
Ssu2g0765 470 CDD GT1_Gtf-like 6 445 IPR002213 GO:0008194
Ssu2g0765 470 PANTHER GLYCOSYLTRANSFERASE 1 469 - -
Ssu2g0765 470 ProSitePatterns UDP-glycosyltransferases signature. 345 388 IPR035595 -
Ssu2g0765 470 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0765 Ssu-Chr2 40671090 40672502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0765 3 467 Glycosyltransferase AT1G01420 48.283 2.28e-163 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0765 K08237 - gmx:100779176 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0765 2 40671090 40672502 Ssu3g1571 3 42340415 42341821 PCT