Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0763 ATGGCGAAAACAACTCACATTGCTGTCGTTGCTGGTCCTGGCTTCACCCACTTAGTCCCCATTCTTCAGTTCTCCAAGAGACTCGTTCATCTCCACCCAGACTTTCATGTCACGTGCATCATTCCCTCACTTGGGTCTCCCCCAAGTGCCTCAAAGACCATCCTTGAAACCCTCCCACCAAACATCACCTCCACTTTTCTTCCCCCAGTGAGCCCCGAGGACCTGCCCCAACGGGTTGCCAACGAAGTCCAAATGCAGCTCACAGTTACACACTCTCTCCCCTCCATACACCAGACCCTGAAGTCCTTAACTTCCGAGGCCACCCTTGTGGCCATGGTGGTCGATTCTTTCGCCTTTGAAGCACTAGATTTTGCTCAAGAGTTCAACATGTTGTCCTATGTTTACTTCCCCGCAGCAGCTACAACACTGTCTGTGCTCCTGCATTTGCCCAAGTTGGATGAGGAAACATCGTGTGAGTACAGAGATCTGCCAGACCCCATCAAGGTACCAGGTTGTGTGCCACTTCACGGCAGGGATCTCTATACCCCAACTCAAGATCGGACTAATCTAGTTTACAAACTCTTGCTCCAACGTGTTCAACGGTACCGTTTTGTTGATGGGATGTTCATTAACAGCTTCTTGGAAATGGAAACGGGTCCTATAACAGCATTGCAAGATGAGGAAAGGCGGTACCCTACTATGTATCCTGTTGGACCCCTTGTCCAAACTGGGACAGGTTCTGGTGACGATGGAAGAGGGTTGGAGTGTCTGACATGGTTGGACAAACAGCAAGCTGGTTCAGTTTTGTATGTTTCTTTCGGAAGTGGTGGAACATTGTCACAAGAACAAATGACTGAGTTGGCTCATGGTTTGGAACTGAGTAACCATAAGTTCATATGGGCTGTGAGAGCACCAAATGATGTAGCCAATGCTGCTTATCTTGGTGCACAAAAGTATGTTGACCCTCTACAGTTTTTACCATGTGGGTTCTTGGAGAGAACCAAAGATCAAGGTATGGTTGTTCCATCATGGGCACCCCAGATTCAAATCCTTAGCCACAGTTCGGTTGGTGGGTTCTTGACTCACTGTGGCTGGAATTCGACCCTTGAGAGTGTGCTTCAGGGTGTGCCACTCATCACGTGGCCACTGTTTGCGGAGCAGAAAATGAACGCGGTTGTGCTGAGTGAGAGCCTCAAAGTTGGAGTGAGGCCGAAAGCTAATGAAAATGGGTTGGTGGAAAGGGAAGAAATTGGTGATGTGGTGAAGCGTTTGATGGAAGGGGTAGAAGGTGTTAAACTTCGCAACAGAATGAAGGAGTTGAAAGAAGCTGCTACTAATACACTCATGGAAGATGGGGCTTCCACAAAGACGCTTTCGGAGTTAGCACTCAAGTGGAAAAATTTGGCATAG 1410 0.4844 MAKTTHIAVVAGPGFTHLVPILQFSKRLVHLHPDFHVTCIIPSLGSPPSASKTILETLPPNITSTFLPPVSPEDLPQRVANEVQMQLTVTHSLPSIHQTLKSLTSEATLVAMVVDSFAFEALDFAQEFNMLSYVYFPAAATTLSVLLHLPKLDEETSCEYRDLPDPIKVPGCVPLHGRDLYTPTQDRTNLVYKLLLQRVQRYRFVDGMFINSFLEMETGPITALQDEERRYPTMYPVGPLVQTGTGSGDDGRGLECLTWLDKQQAGSVLYVSFGSGGTLSQEQMTELAHGLELSNHKFIWAVRAPNDVANAAYLGAQKYVDPLQFLPCGFLERTKDQGMVVPSWAPQIQILSHSSVGGFLTHCGWNSTLESVLQGVPLITWPLFAEQKMNAVVLSESLKVGVRPKANENGLVEREEIGDVVKRLMEGVEGVKLRNRMKELKEAATNTLMEDGASTKTLSELALKWKNLA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0763 469 Gene3D Glycogen Phosphorylase B; 6 454 - -
Ssu2g0763 469 ProSitePatterns UDP-glycosyltransferases signature. 344 387 IPR035595 -
Ssu2g0763 469 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 254 395 IPR002213 GO:0008194
Ssu2g0763 469 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 468 - -
Ssu2g0763 469 PANTHER GLYCOSYLTRANSFERASE 1 468 - -
Ssu2g0763 469 CDD GT1_Gtf-like 6 444 IPR002213 GO:0008194
Ssu2g0763 469 Gene3D Glycogen Phosphorylase B; 249 449 - -
Ssu2g0763 469 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0763 Ssu-Chr2 40605185 40606594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0763 2 466 Glycosyltransferase AT1G01420 48.283 1.76e-165 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0763 K08237 - gmx:100779702 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0763 2 40605185 40606594 Ssu3g1576 3 42514390 42515808 PCT