Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0647 ATGGCATCACCTCATCCACCCTTTATCACCACCGCCGTTTCCCTCTTCATcattttcctctctctctccttaaCCCCTTCCCACTCCGCCCTCACCTGCAACTCGCCGAAGCTCCCCGCGAACCGCACCTACGCGAACTGCACCGCCCTCCCCACCCTCGGCGCCATCCTCCACTACACCTACAACGCCACCAACCGCTCCCTCGCCGTCGCGTTCGCCGCCGAGCCGCCGTCCTCCACCGGCTGGGTCGCCTGGGCCCTCAACCTCAACGGCGGTGGTATGATAGGCGCCGAGGCGCTCATCGCCTTCCCCGTCAACGGCGCCCTCACCTTCCGCCGCTACAACCTCACCGCCTACAAAGGCATCGACGAAGTCAAGGAATTTACCTTCGAGTCGTCCGATGTCTCCGCGGAACAGATCAGCGGCGCGACAGTGATCTTTGCCGTCGTTACGATTCCCGAGACAGCGGGGAACGTGAGCCACGTGTGGCAGGTGGGGCCCGTCGTGGGAGGGAACCCGTCGATCCACGCGACGAAGCCGGAGAATCTCGAGTCCAAGGCGACGCTGCCGGTGGCGTTGACGGCGGCGAGTGGGGGTGGGAACAGTAGCGGTAGTGGGAACGCGAGTGCTCCCGCGAGTGGGGTGGGAGAGAGGTTTGGGGTGGGGTTTCACTTTGGGTTGGTGTTGGCATTGATGATGGGTCTTGCTGTCGCGATTTGA 720 0.6208 MASPHPPFITTAVSLFIIFLSLSLTPSHSALTCNSPKLPANRTYANCTALPTLGAILHYTYNATNRSLAVAFAAEPPSSTGWVAWALNLNGGGMIGAEALIAFPVNGALTFRRYNLTAYKGIDEVKEFTFESSDVSAEQISGATVIFAVVTIPETAGNVSHVWQVGPVVGGNPSIHATKPENLESKATLPVALTAASGGGNSSGSGNASAPASGVGERFGVGFHFGLVLALMMGLAVAI 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0647 239 CDD DOMON_CIL1_like 44 192 IPR045265 -
Ssu2g0647 239 Pfam Protein of unknown function (DUF568) 94 189 IPR045265 -
Ssu2g0647 239 ProSiteProfiles DOMON domain profile. 53 166 IPR005018 -
Ssu2g0647 239 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 11 213 - -
Ssu2g0647 239 PANTHER AUXIN-INDUCED IN ROOT CULTURES PROTEIN 12 11 213 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0647 - - vun:114166103 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1487 3 38913570 38916238 Ssu2g0647 2 36680035 36680754 PCT