Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0589 ATGGGCTGTTTGGATGAGGGGCATTTGAATGGGGATCTTGAAAATGGAGTGAGTATTGGGTGTGGTGAAGTGGGTTTTGAGGAGGAGGCAGAGACAGATATTGCTGCCATTGAGGATGCTGTGAGAGTGCTGTTGCTGGGTCTTGGGGAGGATATCAACAGGGAAGGTCTTAGGAAGACACCACTTCGTGTTGCCAAGGCCCTCCGTGAAGGAACCAGAGGGTACAGACAAAAAGTGAAGGACATTGTTGAAGGTGCTTTATTTCCTGAAGCTGgtctagaaaataataaaattggtcATGCAGGGGGCACAGGCGGACTTGTGATTGTCCGAGATCTTGACCTTTATTCCTATTGTGAGTCTTGCTTGCTACCATTCCAAATCAAGTGTCATGTGGGTTATGTCCCTTCTGGCCAAAGAGTTGTGGGTTTAAGTAAGCTCTCTCGCGTCGCTGATGTATTTGCTAAACGACTCCAGGAGCCTCAGCGTCTGGCAGATGAGGTTTGTTCAGCTTTGCATCAGGGAATAAAGCCAGCAGGTGTTGCTATTCTACTTCAGTGTACACATATTCACTTTCCAGACATAGAATCAATCTTTTTTGAATCAAACCAGCAAGCGTGGGTGAAGACACTTGTTTTGTCAGGTTCTGggatttttgaaatcaaaagtGCAGGTGTATGGTCTGATTTCTTTTGCCTTCTTAAATTTAGAGgtattgaaatagaaaaaattcatCTAATAGGATCATCTGACCAATGCTGGTGTCCATCTCTGTCTGCTCTTTCTGCAAAAGTTTCCTCCAAAATTATACCAGTCAATCCTGCAATGGTCACTGCAGTATCTTCAATTCTTAATTCTCTGGGAGAAGATTCATCAAGGAAGGAGCTTGCAGGGACTCCTAGTCGGTTTGTGAAATGGCTATTGAACTTCCAAAGCATTGACATGGATGTGAAGCTGAATGGTTCCCTTTGTGGCGGGATAGATACTCTGAACCTCAATAGGGAGGTGAACTTCAATGACAAACAAATACACTGTGAGTTGAACTTGCCATTTTGGTCACAATGTGAGCATCATATACTTCCATTTCATGGTGTTGTTCACATTGGATACTTCCTTTCAGAAGGATTTAATCCCATTGGAAAATCCCTTGTACAGTCTATAGTACATTTTTATGGTTTGAAACTCCAGGTTCAGGAAAGACTTACAAGACAAATAGCAGAAACCATTGCACCACTATTATTAGGTGGACATGTAATAGTAGTTGTAGAGGCAAGCCACACATGTATGATTTCTAGGGGAATTGAGAAGTTTGGAAGTAGTACAGCTACCATTGCTGTATTAGGACACTTTTCAACCGACCTTGCCGCAAGGGCCGCGTTCTTGCAGAGGGTTGCAAGTGCCACAACTTCTGGGGGGCAATAG 1422 0.4226 MGCLDEGHLNGDLENGVSIGCGEVGFEEEAETDIAAIEDAVRVLLLGLGEDINREGLRKTPLRVAKALREGTRGYRQKVKDIVEGALFPEAGLENNKIGHAGGTGGLVIVRDLDLYSYCESCLLPFQIKCHVGYVPSGQRVVGLSKLSRVADVFAKRLQEPQRLADEVCSALHQGIKPAGVAILLQCTHIHFPDIESIFFESNQQAWVKTLVLSGSGIFEIKSAGVWSDFFCLLKFRGIEIEKIHLIGSSDQCWCPSLSALSAKVSSKIIPVNPAMVTAVSSILNSLGEDSSRKELAGTPSRFVKWLLNFQSIDMDVKLNGSLCGGIDTLNLNREVNFNDKQIHCELNLPFWSQCEHHILPFHGVVHIGYFLSEGFNPIGKSLVQSIVHFYGLKLQVQERLTRQIAETIAPLLLGGHVIVVVEASHTCMISRGIEKFGSSTATIAVLGHFSTDLAARAAFLQRVASATTSGGQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0589 473 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 274 464 - -
Ssu2g0589 473 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 22 192 - -
Ssu2g0589 473 Gene3D - 333 467 IPR043133 -
Ssu2g0589 473 Gene3D - 100 236 IPR043133 -
Ssu2g0589 473 PANTHER GTP CYCLOHYDROLASE I 1 470 IPR001474 GO:0003934|GO:0046654
Ssu2g0589 473 Pfam GTP cyclohydrolase I 37 190 IPR020602 -
Ssu2g0589 473 Pfam GTP cyclohydrolase I 278 464 IPR020602 -
Ssu2g0589 473 Gene3D - 26 82 IPR043134 -
Ssu2g0589 473 Gene3D - 272 318 IPR043134 -
Ssu2g0589 473 PANTHER GTP CYCLOHYDROLASE I 1 1 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0589 Ssu-Chr2 34129509 34131941 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0589 K01495 - gmx:100780537 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1461 3 38010543 38013963 Ssu2g0589 2 34129509 34131941 PCT