Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3642 ATGTCTCCTGCTTTCAGGAGTTATTATTTTGTCCAGAAGCCTGTTCACTGCTGCTCCACAATTTCTGCATATATCATATTAGTCCACCTGGGCATGAGGTCTCTAACTTTATGTCTTGAAACTTTGGGAGCTGCTATCATTGATCCGGATGATCCAATTCTTTCTGCTGATGACTTAGCTGAACAAATAGCTGAAGTTCTTAACTTTTTTGGTCTTAATGCAGTCATGTGTATGGGAGTAACTGCTGGGGCTTACATTCTTACCTTATTCGCTGTGAACTATAGACATCGTGTTCTTGGTTTGATACTTGTTTCTCCTTTATGTAAAGCACCATCTTGGACTGAATGGTTGTACAACAAGGTCATGTCAAATTTACTCTACTTTTATGGCATGTGTGGGGTGGTAAAAGAAATATTGCTAAACCGATATTTTAGCAAGGAAGTTCGAGGCAGTGCTTATTTGCCAGAGTCGGATATAGTTCAAGCATGCCAAAGGTCATTGGATGAGAGACAGAGTTTGAATGTGTGGCGGTTCCTTCAAGCAATTAATGGGAGATATGACATAAGTGAAGGATTGAGAAAATTACAGTGTCGTTCACTAATTTTTGTTGGGGATATGTCTCCTTTTCACTCTGAGGCTCTCCATATGACATCTAAGTTGGATAGACGATTCAGTGCCTTAGTCGAGGTTCAAGCGTGTGGGTCAATGGTAACAGAGGAGCAGCCTCATGCTATGTTAATACCGATGGAGTACTTTCTCATGGGATATGGCTTGTACAGACCATCTAAGCTGAGTGTCAGCCCAAGAAGTCCCCTGAGTCCAACTTGCATTTCTCCTGAGCTTTACTCCCCAGAGAGTATGGGTTTGAAATTGAAACCAATAAAGACACGAATTTCCGTGGAGATGTAG 909 0.4158 MSPAFRSYYFVQKPVHCCSTISAYIILVHLGMRSLTLCLETLGAAIIDPDDPILSADDLAEQIAEVLNFFGLNAVMCMGVTAGAYILTLFAVNYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYFYGMCGVVKEILLNRYFSKEVRGSAYLPESDIVQACQRSLDERQSLNVWRFLQAINGRYDISEGLRKLQCRSLIFVGDMSPFHSEALHMTSKLDRRFSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPSKLSVSPRSPLSPTCISPELYSPESMGLKLKPIKTRISVEM 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3642 302 Pfam Ndr family 42 260 IPR004142 -
Ssu1g3642 302 PANTHER PROTEIN NDL2 41 301 - -
Ssu1g3642 302 Gene3D alpha/beta hydrolase 22 255 IPR029058 -
Ssu1g3642 302 SUPERFAMILY alpha/beta-Hydrolases 49 253 IPR029058 -
Ssu1g3642 302 PANTHER N-MYC DOWNSTREAM REGULATED 41 301 IPR004142 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3642 Ssu-Chr1 92033715 92036223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3642 - - gmx:100804729 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0388 5 8236045 8244102 Ssu1g3642 1 92033715 92036223 PCT