Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3628 ATGGAAGGCATAGGTTGCTGCTCAAACGACGTCGTAGGCCAGCTGGAGGTCAGTGCCATCACTATGAGCAACTCCTCCTCCCTGTCCATGGACCTGGACGAGTCCACGGAGAGCCGAATCCAACGGCTAATATCGGAGCACCCCGTGATCATCTTCACCCGATCCTCCTGCTGCATGTGCCACGTCATGAAGAAGCTCCTCGCCACCATCGGCGTCCACCCCACCGTCATCGAATTGGACGACCACGAGATCCCCGCCCTACCCCTCTCCGACACCACCGCCCCCGCGGCCTTCATCGGCGGCACCTGCATCGGCGGCCTCGAGTCCCTCGTCGCCCTCCACGTCAGCGGCCACCTCATCCCCAAACTCGTCGAAGTCGGCGCTCTCTGGAATTTAGGTGAGTCGCTTAATGAACCTGCTCTCGCCGTTTACGGATCGGAGGCAACACGTGTACAGGAATGGCATCCATGA 471 0.6051 MEGIGCCSNDVVGQLEVSAITMSNSSSLSMDLDESTESRIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVHPTVIELDDHEIPALPLSDTTAPAAFIGGTCIGGLESLVALHVSGHLIPKLVEVGALWNLGESLNEPALAVYGSEATRVQEWHP 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3628 156 Gene3D Glutaredoxin 30 131 - -
Ssu1g3628 156 PANTHER GLUTAREDOXIN-C6 13 130 - -
Ssu1g3628 156 Pfam Glutaredoxin 49 103 IPR002109 -
Ssu1g3628 156 PANTHER GLUTAREDOXIN 13 130 IPR011905 -
Ssu1g3628 156 CDD GRX_GRXh_1_2_like 48 122 - -
Ssu1g3628 156 ProSiteProfiles Glutaredoxin domain profile. 37 130 - -
Ssu1g3628 156 SUPERFAMILY Thioredoxin-like 37 130 IPR036249 -
Ssu1g3628 156 TIGRFAM GlrX-like_plant: glutaredoxin-like family 40 130 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3628 Ssu-Chr1 91857841 91858550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3628 39 130 Miscellaneous Gene Families AT4G15660 42.000 1.72e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3628 - K03676 gmx:100791969 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0417 5 8665589 8667396 Ssu1g3628 1 91857841 91858550 PCT