Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3532 ATGTTGAAAGGAAGTGAGAGCGGTGCAGTTCCTGAACCGGTTATGGATGCAGTCAACACTACTCTCTCTAACCTCCGACAACTCCGAACGCACTTTCACGAGTTCTTGTCTCTCTCCGACCCTCAAATTCTCGCCCAAATGCCCCCTCTTCAACGCGCTCACTCCCTCTTCATCCTCGCCAAAATCACTTCTACCCTCCTCGCATTGAACTTGAGGTGTAGTGGGGTCCACCCGGATGATCATCCCATCAAATCAGAGCTTGATAGATTGAACTTGTACGAGGACAAACTGGAGCGTTTGCTTGATTTGAGTAAAGCTCCGCTACGACCTTCTACTACCTTGAATTATCAGGCGGCAACACGCTTCATAGAACACTCTCTGCCTGACCTAACTCCAGTGCAGAGGGAAAATATGAGGAACATTAGTAGAGGGGAGGGACTGAAGATGAACCGTCCGGGTTGGGCAGGTCAAAAGAGGAAGTATCAATCTTCTGATAAACAATCTGTTCAAGCGGCTGCCAAGGAGTTTCTGAAGAAAGCGGCCCGGGAGCTTCTTGGTGATAACAGTGGCGGTATTAAGGGACCATTACAAGTTGACATTTCGGAGGAGGACGAGGATGAACTGCCTGAGCCCTGA 636 0.4953 MLKGSESGAVPEPVMDAVNTTLSNLRQLRTHFHEFLSLSDPQILAQMPPLQRAHSLFILAKITSTLLALNLRCSGVHPDDHPIKSELDRLNLYEDKLERLLDLSKAPLRPSTTLNYQAATRFIEHSLPDLTPVQRENMRNISRGEGLKMNRPGWAGQKRKYQSSDKQSVQAAAKEFLKKAARELLGDNSGGIKGPLQVDISEEDEDELPEP 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3532 211 Coils Coil 83 103 - -
Ssu1g3532 211 MobiDBLite consensus disorder prediction 184 211 - -
Ssu1g3532 211 PANTHER NUCLEAR NUCLEIC ACID-BINDING PROTEIN C1D 8 197 - -
Ssu1g3532 211 PANTHER SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR 8 197 IPR011082 -
Ssu1g3532 211 MobiDBLite consensus disorder prediction 144 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3532 Ssu-Chr1 90235513 90236765 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3532 K12592 - gmx:100795174 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3532 1 90235513 90236765 Ssu1g3532 1 90235513 90236765 ECH
Ssu5g0472 5 9928552 9929872 Ssu1g3532 1 90235513 90236765 PCT