Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3486 ATGTTAAGTTACCGGCCACTGCATTTTTGTTTTCTGGTCACATTTTTCTTGTCCGCCTCCTTTTTGCTGTCACACCAAGCTTCAGGGCCAGAAAATGAGGGGAAGGATGTAGGCTTTTCCCGTTTGATTGTTTATGCTGCTGCACCATTCGAGAACTCGCCTCTTCCCTTAGCTGCTGAGAGAACACGAAGGAAAAACCCTCTCGATGGCTTCAATAAGTACATATATGGATGGAATATCAGTAGCAACAATTATTGGGCTTCTGTGGCATATACTGCAGTTCCTGTGTTCAGTATTGCAGCCGTCTGGTTCTTGGGCTTTGGCTTGTGCTTATTGATCATAACTGTTTGTTACTTCTGTCGAAAAAGAGAGCCTTATGGTTATTCACCAACATGCTATGCCCTTTCCCTTATTCTCCTGATATTATTCACATTTACAGCAATGATTGGATGTGCAGTTCTGTACATTGGCCAAGGAAGTTTTCATCATAGCATGACATCAACATTGCAGTATGTGGTACATCAAGCTGATTCTACTGTGGATAAGCTTAGGAATGTGTCAGATTATCTTGCTCAAGCTAAGCAGGTTGGAATCGATCGAGTTTTTCTCCCCACTAATGTTCAAACTGATATTGATGAGGCAGAAACAAATATCAATACCTCTGCTAGCACACTTGCTGATAAGACAAAGGAGAACTCAGACAACATACAAGATCTCTTAGATTCTGCGAGGGTGGCACTTATCATTATAGCTGCTGTTATGCTAGTCTTGACATTTCTTGGATTTTTATTCTCAATTTTTGGCATACAGCTCCTTGTGTATATCTTGGTAATCGCAGGATGGGTTCTGGTTACTGGCACCCTTATATTATGTGGCTTGTTCCTTATTCTCCATAATGCAACAGCAGACAGTTGTGTAGCTGTGAATGAATGGATCCAGTATCCCACTGCACGTACGGCTATGGACGATATTCTGCCTGTGTGGACATGCCACTGCACAAGAAACATTGTCACGAAGCAAAGAAGTAACTTCTGA 1035 0.4203 MLSYRPLHFCFLVTFFLSASFLLSHQASGPENEGKDVGFSRLIVYAAAPFENSPLPLAAERTRRKNPLDGFNKYIYGWNISSNNYWASVAYTAVPVFSIAAVWFLGFGLCLLIITVCYFCRKREPYGYSPTCYALSLILLILFTFTAMIGCAVLYIGQGSFHHSMTSTLQYVVHQADSTVDKLRNVSDYLAQAKQVGIDRVFLPTNVQTDIDEAETNINTSASTLADKTKENSDNIQDLLDSARVALIIIAAVMLVLTFLGFLFSIFGIQLLVYILVIAGWVLVTGTLILCGLFLILHNATADSCVAVNEWIQYPTARTAMDDILPVWTCHCTRNIVTKQRSNF 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3486 344 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 43 337 IPR040283 -
Ssu1g3486 344 PANTHER TRANSMEMBRANE PROTEIN 43 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3486 Ssu-Chr1 89228093 89231500 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3486 - - gmx:100798323 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3486 1 89228093 89231500 Ssu1g3486 1 89228093 89231500 ECH
Ssu6g0936 6 15118578 15122048 Ssu1g3486 1 89228093 89231500 ECH