Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3467 ATGTCTCTGAAACCGTCCTATTCGTTGGAGAATCTGATGCTTCCGGTATCGGATCCTCCGAACGACGAAGACCGAGAGAGGCTTTTGAAGACCGATGATAAGACCTTTCGAGGACGAAGGATCTATGCTGCCATCTCTTACATGTCATGTGCAGTGCTCTTGGTGCTGTTCAATAAAGCCGCTCTTTCGTCTTTTAATTTCCCTTCTGCAAGTGTCATCACGCTTCTTCAGATGGTATGTTCATGttgttttctttatgtattGAGGCGCTGGAGGATAATTTCTTTCACAGCGGCCGAATCTGTAATTATAGCAGATAACTCAAAAAGATTTGTGCCACTGAAAACTGTGAAGCACACTCTTCCTCTCGCAGGAGCATATTTACTTTACATGCTAGTCACCATGGAGTCTGTTCGTGGAGTAAATGTTCCAATGTACACTACCCTTAGGAGGACAACAGTGGTATTTACGATGCTTGTAGAATATATGATGGTGGGGCAGAGGTACACACCTTCTGTTATTTTCAGTGTTGGCTTGATTGTCTTTGGTGCATTCATTGCGGGAGCACGGGATTTCTCTTTTGATGGCTATGGCTATTCCATTGTTTTCCTTTCAAACATCACCACGGCTATATATCTTGCAACCATAGCTCGTGTTGGCAAAACTAGTGGCCTTAATAGCTTTGGCCTTATGTGGTGCAATGGTGTCATATGTGGGCCCTTTTTGCTTATTTGGACATTAGTTCGGGGTGACTTGAAGATGACACTCAATTTTTCTTACCTTCTTTCACCTGGTTTTATTGTATGTTATTCTTGA 816 0.424 MSLKPSYSLENLMLPVSDPPNDEDRERLLKTDDKTFRGRRIYAAISYMSCAVLLVLFNKAALSSFNFPSASVITLLQMVCSCCFLYVLRRWRIISFTAAESVIIADNSKRFVPLKTVKHTLPLAGAYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMLVEYMMVGQRYTPSVIFSVGLIVFGAFIAGARDFSFDGYGYSIVFLSNITTAIYLATIARVGKTSGLNSFGLMWCNGVICGPFLLIWTLVRGDLKMTLNFSYLLSPGFIVCYS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3467 271 Pfam Triose-phosphate Transporter family 51 210 IPR004853 -
Ssu1g3467 271 PANTHER UDP-SUGAR TRANSPORTER-LIKE PROTEIN 14 268 - -
Ssu1g3467 271 PANTHER SOLUTE CARRIER FAMILY 35 14 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3467 Ssu-Chr1 88914087 88917754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g3467 18 235 Organic Solute Cotransporters AT2G13650 22.707 3.99e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3467 K15281 - gmx:100778544 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3467 1 88914087 88917754 Ssu1g3467 1 88914087 88917754 ECH
Ssu5g0564 5 12468485 12476534 Ssu1g3467 1 88914087 88917754 PCT