Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3462 ATGTCTACGATGAAGTGCTGGGCGACGAGGTTGTCGGGGCACACCAACAAACACGCAGTGAAGCTGAGCCAACTGAAGCTCGAATTAGGACTGTTCGGAGCCAGGCTGGGTGCCGCAAACGACAAGGTCGCCGTCGAAATAACAGGAATTGCTACGAAGAATGGAAAACCTTCGAGTTCAAAGCCGAAAACGACGCCTATTTCACTTGTTCCCTTTCATAAACGACTATGCACTCACACCACCACTTCCCGTAGGTTCCTCAGTTCCAAATCGCCCTCTCTCGGGTGGGACGCGCGCGACCTCTGCGGTTTTCATCTCCTCCTTAAAGACGGGTCCCTCGATGTTTGCGACATGGCATTTCATGTCTTATATGGAGAGGGGGGTGCGGGAGAATCCAAAGCGAAAATGACGGTGGTCGGAAAAGTGGAAATGAGCGTTGCCGTGGCGGAGTTGCTGGTGAGGGAGGAGAAGAAGACGCAGTCCAAGTCTCATCATCACTTTCAAAGAAGGCTTCCAATCAAGTTGAGGGTCAATGGTTTATGCATAGAAGCTACCCTTTTGGTCTCTATGAGGTTATTGAAGCTGAGGGATTCAAATGGTGACTCAGCGTCAGCAGGACGCTTTGAAAACCGGGTCCAGTCACAGAAGAAACGCGGGATTATGGAGACAGTGATGTACTTGACTAGCTtggggaagaaaaataatagcaagTTTGATGAATCGGAACAAACGAGTCCGTACGACTCGGATAGCTCCCCCGTGTTTGACTCGGACGACTCGTCGAACGAGTCCTCCACAAGCAGTGGCAGCAGCAAGAGCGGTGGAATCCACAACGCACGGTCACCACTCGGAAACGGGTCTGAGAGGTTTACAACCTCGGAGACAAAGACTCGTTCGAGTTTGTCCCAGTTGCCACGGAATAGAAGCCTCAATGGATGGAACTTCAAGACAGccacaaacaaacaagaaactCCAACTTCCAGTTCTGCTCCTTTCACGGTATGTCCCTTAATTACTTCAAAGGGTTTGATTATTAttgcaataaataaaacaaatgtgTGTCACTTTTTTGGTAGACTAACTAAACAATTAGTAAATGCTCTTGTTAACTTGTTGCAGAAATCAGATAAACTTTCTCCACAATTATACCATAAAGGCGGTGCAAGAAGCTGGGAATGCAGGGAGATTTCAAGTAGAGATGGGCAAGCAAAGCTCAAAACCAATGTGTTTTTCGCTTCCTTTGACCAAAGAAGCGAACAAGCGTCTGGTGAGAGTGCGTGCTCGGTTTTAGTTGCACTCATAGCCCACTGGCTCCACTCCAACCATGGTATGCCAACAAGAGCTCAATTTGACAGACTCATTACACAAGGTTCATCTGAATGGAGAAGGCTGTGCAACAGCGACCACTACTCAAAGCTCTTCCCGGATAAACATTTTGATCTAGAAACAATCATAGAAGCCAATCTGAGACCTCTGGTTGTTCTGCCTCAGAAATCTTATACGGGTTTTTTCTCCCCCGACAAGTTCCAGTGCTTGAAAGGAGCCATGTCTTTTGACGAAATTTGGGACGAGATAAAGAGCAAGGTGGGTGATCAGGAGCCAAGAATTTACATAGTGAGTTGGAACGATCATTTCTTTGTCTTGAAGGTAGAAGCAGATGCTTGCTACATCATTGACTCTTTTGGGGAGAGACTTTTTGAGGGGTGTCAACGGGCATTCATACTAAAGTTTGATGAATCGAGTGTCATGTATGGGAAAACAGACAAAGCAAAAGAGGTTCCTTCAAAGGGAATGAGTTGTGCTAAGAGTGGGGAAAGCCGTGAGATAATTTGCAGTGGAAAAGAGTGCTGTAAAGAGTTCATCAAACGCTTTCTTGCTGCTATACCACTTTGGCAACTAGTGAAGGAGGAGAAGAAATGGAGTGGTCCCTTTCTTCACCGGCAATTGCAGATTGATTTCCATTACAGCTCTTCATCATCCTCGTCTGCTTCTTCTTTGTGGTCTCTCTTATCAAGTGGGCCTTCAGAAGCCTAA 2034 0.4553 MSTMKCWATRLSGHTNKHAVKLSQLKLELGLFGARLGAANDKVAVEITGIATKNGKPSSSKPKTTPISLVPFHKRLCTHTTTSRRFLSSKSPSLGWDARDLCGFHLLLKDGSLDVCDMAFHVLYGEGGAGESKAKMTVVGKVEMSVAVAELLVREEKKTQSKSHHHFQRRLPIKLRVNGLCIEATLLVSMRLLKLRDSNGDSASAGRFENRVQSQKKRGIMETVMYLTSLGKKNNSKFDESEQTSPYDSDSSPVFDSDDSSNESSTSSGSSKSGGIHNARSPLGNGSERFTTSETKTRSSLSQLPRNRSLNGWNFKTATNKQETPTSSSAPFTVCPLITSKGLIIIAINKTNVCHFFGRLTKQLVNALVNLLQKSDKLSPQLYHKGGARSWECREISSRDGQAKLKTNVFFASFDQRSEQASGESACSVLVALIAHWLHSNHGMPTRAQFDRLITQGSSEWRRLCNSDHYSKLFPDKHFDLETIIEANLRPLVVLPQKSYTGFFSPDKFQCLKGAMSFDEIWDEIKSKVGDQEPRIYIVSWNDHFFVLKVEADACYIIDSFGERLFEGCQRAFILKFDESSVMYGKTDKAKEVPSKGMSCAKSGESREIICSGKECCKEFIKRFLAAIPLWQLVKEEKKWSGPFLHRQLQIDFHYSSSSSSSASSLWSLLSSGPSEA 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3462 677 MobiDBLite consensus disorder prediction 234 313 - -
Ssu1g3462 677 MobiDBLite consensus disorder prediction 657 677 - -
Ssu1g3462 677 PANTHER - 7 666 - -
Ssu1g3462 677 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 7 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3462 Ssu-Chr1 88848368 88851409 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3462 - - gmx:100790631 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3462 1 88848368 88851409 Ssu1g3462 1 88848368 88851409 ECH
Ssu5g0567 5 12532770 12535358 Ssu1g3462 1 88848368 88851409 PCT