Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3163 atgttgcgAAGGGCAGCAACCAATGCATATTCATGGTGGTGGGCAAGCCACATCAGGACAAAGCAATCCAAATGGCTAGAACAAAGTCTCCAAGATATGGAGGAGGTGGTGGCTGAAACCCTCAAAATCATTGATGATGAAGGGGAGTCATTTTCCCAAAGGGCAGAAATGTACTACAGGAAGAGGCCACAGCTGGTAGGTTATGTGGAAGAAGTCTTCCGAGCATATAGAGCATTAGCAGAGAGATATGATCATCTATCAAAGGAGCTCCAAAGTGCCAACCGCACTATTGCCAGTGTTTTCCCGGAACAAGTCCATTATAGAATTGATGAGGATGATGGTGAAGAAAGTTTCCATGGAACAAATTCATCAtctcaagaccccaacaatcAAACACCAAAACCAGGCGTTCCTAAAGCTCCAAATATCCCAAAGAAGGATTTTAGAAGCCCGTCCATGTTGCTCTCTAGGAAGGGTCCACTTAGGAGGGTTGCTGGCTCTGTAAAATCTCCTCCCACAATCCCTAGTTCAGGTCTGAGTAAGGCTGAAGCACTAGCAGAAGTTGACAAGCTTCAGAAAGAAATGTTGGCACTACAGACTGAGAAAGAGTTTGTAAGGAGCTTGTATGAACATTCCTATGAAAAGCACTGGGAAATTGAAGACCAGATTACAGAAATGCAAAAAAGGGTTTGCAGCTTGCAAGATGAGTTTGGCATTAATACAATCATAGAGGATAATGATGCACGAGCTTTGATGGCTGCAACAGCTCTAAATTCATGCAAAGAGACCCTGGCTAAGTTGCAAGAGGTGCAGGCACAATCATCTGAAGAGGCTAAAGCAGCATACCAAAGGGTTAAGGAAGTTCATGACAAGTATGAAACCCTTAGAGACCAATTCATTTCTAACCATAAGAGTCAACAAGATCAAGGAACAGAAACAAAAAGCATAGAGGAAGAAGACATGTCTAGCTTGGAAGAAGAAATGCATGAGCATGATGTGGAGCTGTTGGAAGACATGATTAAGGAAAAGCTTGAAGAAGATTCAGGTAGGTCCCTCACTATGACAGAAATGGCAGAGAAGATTGATGAGCTCGTAAGTAAGGTTGTTACCCTGGAAACCGCGGTCTCTTCTCAGACTGGCTTGGTAAAGAGACTGAGATCAGAAGCAGATGAACTTCAGAAAAATTTACGGTGCTTGGAAGAGGACAAGGAAGTGCTGGTAGAAGATTCAGAAGAAACCAAAAAGAAGCTGAAAGAAGTGGAAGAGGAGTTGAGGAGAGTTAAATTTCTCAATCAAAGTGTCAAAAGGCAAGACAACAGCCTCCAAACACACTTTACTGAAGCTAGTTGTGATCTTGAACATCTTTCAGGAAAATTGAATGATGTGAAGCTAGATGAGGAGGGGGAGAACTTGCTACTTTACAAAAACAGAAGTGCACCAGATGGAGAACTGAAAGAGGAGTCTGAAAAGCCAGGTGATAACACAGAAACCATGAAGGATGTTGAGACAACAAAGGAGGAAAAGGAAGATTATATTGTAAATCTTGGTGATGTTATAAATGAAGATAACAAGTCCAATTTGAAAATGCTGCAGAATAATGATGATTTGTCTGAGGCAAGGAGTAATCTTGTCACTGAATCACTTGATCAGGGGACTGGTGAGGAAGAAGATCAACCTAACTGGAGTCAGATGTTTGGAAGCGGATTAGATGACAGAGAAAAGATTCTGTCGGAATACACATCAGTTTTAAAGAACTACGAGGATGTAAAGGGCAAGCTCAATGATGTGGAGAAGAAAAATCAGGACAACATTTTTGAGTTGTCACTTCAGGTAAAGGAATTGAAGGATACTGTTGAAACTAAGGATAAGGAGATAAACATTTTACAACAGAAGCTGACCTGTTCAGAAACAAATCCAGATGAAAATCCTTGCACCACTCTCACAGATTGTAACTATACACCACAAGAAGCACTTCTTGGAACTGCAGCTCAAGGAACAGACACACAGGACCCTGAAAACCCTTCTTCAAACACAGGTGTAAATGCAGTTAGTACTTCTTATGCAGAGCAACACCAACAACATGTTGAAAACAAAGGAAAGTTTGGCATTGGCATGTCACCTGGAAAGGCCATATTAGTGAAGGTGAGAACAAACCAGCTTGTTAAGAGCCATTCACTTTCAACCTTGGAAAAGAAATTTCGTTCAGACATTGATGATTTGCTAGAGGAGAACTTGGAGTTCTGGTTGAGGTTTAGCACCTCAGTGCATCAGATTCAAAAGTTCCAAAACTCTATACAGGATTTAAAATTTGAGCTTACAAAAATAAGGGATAACAATATGCCCCAGGAGAACTTAAATTCTATACAATCTGAGATAAAACCAATATTTGGACACCTGAGAGAGATAAGAACTGAGTTATCATTGTGGCTGGAATACAATGAAGTGTTGCAGGAAGAGTTGCAAGGTAGGCATCCATCCTTGTGCACCTTTCAAGATGAAATAGCAAGAGCAGCCAATCCAAATTGTGCATCAAATATGGCAGAACTAAGTGGGTATCAGGCTGCAAAGTTTCAAGGTGAGGTTCTCAACATGAAGCAGGAGAACAACAAGGTTTCTAGTGAACTGCAAGCAGGTCTCACTTTTGTGAAGGGTCTGAAAGGTCAAGTTGAGAAGATGCTAGAAGAACTGAGTCAAGAAATTGGGGTTAACAATCATGACCATATGAAACACTCCACAAGTCGTGTTAGGATACCCTTGAAGTCTTTTCTGTTTGGAATCAAGTTAAAGAAGCAAAGGCAATCGGTCTTCGCATGTGTCAATCCAACAATGCAGAGACAGTACAGTGATCTAGCAGCGGTTGATGATGCCCCTATATAG 2877 0.4095 MLRRAATNAYSWWWASHIRTKQSKWLEQSLQDMEEVVAETLKIIDDEGESFSQRAEMYYRKRPQLVGYVEEVFRAYRALAERYDHLSKELQSANRTIASVFPEQVHYRIDEDDGEESFHGTNSSSQDPNNQTPKPGVPKAPNIPKKDFRSPSMLLSRKGPLRRVAGSVKSPPTIPSSGLSKAEALAEVDKLQKEMLALQTEKEFVRSLYEHSYEKHWEIEDQITEMQKRVCSLQDEFGINTIIEDNDARALMAATALNSCKETLAKLQEVQAQSSEEAKAAYQRVKEVHDKYETLRDQFISNHKSQQDQGTETKSIEEEDMSSLEEEMHEHDVELLEDMIKEKLEEDSGRSLTMTEMAEKIDELVSKVVTLETAVSSQTGLVKRLRSEADELQKNLRCLEEDKEVLVEDSEETKKKLKEVEEELRRVKFLNQSVKRQDNSLQTHFTEASCDLEHLSGKLNDVKLDEEGENLLLYKNRSAPDGELKEESEKPGDNTETMKDVETTKEEKEDYIVNLGDVINEDNKSNLKMLQNNDDLSEARSNLVTESLDQGTGEEEDQPNWSQMFGSGLDDREKILSEYTSVLKNYEDVKGKLNDVEKKNQDNIFELSLQVKELKDTVETKDKEINILQQKLTCSETNPDENPCTTLTDCNYTPQEALLGTAAQGTDTQDPENPSSNTGVNAVSTSYAEQHQQHVENKGKFGIGMSPGKAILVKVRTNQLVKSHSLSTLEKKFRSDIDDLLEENLEFWLRFSTSVHQIQKFQNSIQDLKFELTKIRDNNMPQENLNSIQSEIKPIFGHLREIRTELSLWLEYNEVLQEELQGRHPSLCTFQDEIARAANPNCASNMAELSGYQAAKFQGEVLNMKQENNKVSSELQAGLTFVKGLKGQVEKMLEELSQEIGVNNHDHMKHSTSRVRIPLKSFLFGIKLKKQRQSVFACVNPTMQRQYSDLAAVDDAPI 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3163 958 Coils Coil 181 208 - -
Ssu1g3163 958 Coils Coil 375 437 - -
Ssu1g3163 958 Coils Coil 278 298 - -
Ssu1g3163 958 PANTHER PROTEIN NETWORKED 2A 1 950 - -
Ssu1g3163 958 Coils Coil 76 96 - -
Ssu1g3163 958 MobiDBLite consensus disorder prediction 160 179 - -
Ssu1g3163 958 Coils Coil 314 334 - -
Ssu1g3163 958 MobiDBLite consensus disorder prediction 119 133 - -
Ssu1g3163 958 MobiDBLite consensus disorder prediction 475 505 - -
Ssu1g3163 958 MobiDBLite consensus disorder prediction 113 153 - -
Ssu1g3163 958 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Ssu1g3163 958 Coils Coil 611 631 - -
Ssu1g3163 958 Coils Coil 758 778 - -
Ssu1g3163 958 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Ssu1g3163 958 PANTHER PROTEIN NETWORKED 2D 1 950 - -
Ssu1g3163 958 MobiDBLite consensus disorder prediction 479 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3163 Ssu-Chr1 82732801 82736893 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3163 - - gmx:100805236 1448.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2506 6 59056731 59060723 Ssu1g3163 1 82732801 82736893 PCT