Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3091 ATGGATTCTGGTAACAGTGGAAGCATCTCTTCTAGCGATGAAGAATATGATTCATCACATGCCGATCCATCGTTCCTCAATCACTTGGGTTCCATCTCCCAGCCCCAACCATCCCTCGTTCCTTCTCATCCCACAATGTTTGATTTCTCCACAAGCTACCTCCATGCTCTCTCACAATCCCacccaaacccaaacccaaactACCACTCGTTGTTAAACTTGGACTCTCAAGGCCCAAGATCTGAACCGAATTGCACCCACCCGGAAAGCCTACCATcagcaacagcaacaacaaatCAATGCTTGTCGGGTCCTCAACCCCTTGGCCACGACAACATTATTAATGCACCCCCGCCAAATAATAACCTCTTACGCAATTCAAAGAAACGAAGCAGAGCTTCAAGGCGTGCACCCACCACCGTTCTCACCACCGACCCCACCAACTTCAGATCCATGGTTCAAGAGTTCACCGGAATCCCCGCACCTCCTTTTTCACCTCCTTCTCTCGCCGCCCAAACCCTTTGTTTTCAACTTCGAGGACCTTGTtacacaacaacaacaccatCAGTGTTTCTCCTTATAGTAACTACCAACTACTTCCCGATCTATCTTTACCCTATCAGCCACCACCACAGAACATCATGCAAAACCACCCTATTCCCGCGTTCCACCCTTCTCTTCACTCTCTTGTCCCTGCAGGGTTCGGTGCGCATCTGGTGGGTGCTAATGGAGCGTTGGGTCATGAACACGCGGCTTCCGAGGGCGTGCTTCTGA 774 0.469 MDSGNSGSISSSDEEYDSSHADPSFLNHLGSISQPQPSLVPSHPTMFDFSTSYLHALSQSHPNPNPNYHSLLNLDSQGPRSEPNCTHPESLPSATATTNQCLSGPQPLGHDNIINAPPPNNNLLRNSKKRSRASRRAPTTVLTTDPTNFRSMVQEFTGIPAPPFSPPSLAAQTLCFQLRGPCYTTTTPSVFLLIVTTNYFPIYLYPISHHHRTSCKTTLFPRSTLLFTLLSLQGSVRIWWVLMERWVMNTRLPRACF 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3091 257 MobiDBLite consensus disorder prediction 58 143 - -
Ssu1g3091 257 MobiDBLite consensus disorder prediction 58 106 - -
Ssu1g3091 257 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 178 IPR039609 -
Ssu1g3091 257 Pfam VQ motif 136 163 IPR008889 -
Ssu1g3091 257 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 178 - -
Ssu1g3091 257 MobiDBLite consensus disorder prediction 1 43 - -
Ssu1g3091 257 MobiDBLite consensus disorder prediction 24 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3091 Ssu-Chr1 80867649 80868422 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3091 - - gmx:102669874 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2420 6 56701361 56702662 Ssu1g3091 1 80867649 80868422 PCT