Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu1g3079 | ATGCTGTTGGGGAAGAGACCTCGTCCTCCAATGAAGAGAACCACGAGCATGTCGGAGATAACCTTCGATCTGAACACAACCTTGGACGATGATCCAAACAACCCCCTGAACCGGCTGGGACCGGGAGGAGTTGGGCTTGGTGGAGACGGGCCAGGCCCATGGTTGAAACACCAACCTGTTGGGTTCAATGGTTTAGATCAGAGCAGGGTTTGGGCCATGGTTTCACCCAGAAACCATAGAAGGAATTCCGAAGATTTGGCACACACCCATGACTTCTTGCGTGCTTGCTTTCTCTGCAAACGCCGTTTAGTACCCGGCCGTGACATCTACATGTACAGaGGTGATAGTGCTTTCTGCAGTTTAGAATGCCGCCAACAGCAGATGAACCAGGATGAGAAAAAGGATAAGTGTCGTGTGCCATCGAAGAAACAGGTTGCGGCTACGCCTTCTGGGTCTCAAGTCACTACTACCAAAGGCGAAACCGTGGTTGCCTTGTAG | 498 | 0.5161 | MLLGKRPRPPMKRTTSMSEITFDLNTTLDDDPNNPLNRLGPGGVGLGGDGPGPWLKHQPVGFNGLDQSRVWAMVSPRNHRRNSEDLAHTHDFLRACFLCKRRLVPGRDIYMYRGDSAFCSLECRQQQMNQDEKKDKCRVPSKKQVAATPSGSQVTTTKGETVVAL | 165 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu1g3079 | 165 | PANTHER | - | 1 | 163 | - | - | |
| Ssu1g3079 | 165 | MobiDBLite | consensus disorder prediction | 145 | 165 | - | - | |
| Ssu1g3079 | 165 | MobiDBLite | consensus disorder prediction | 130 | 165 | - | - | |
| Ssu1g3079 | 165 | Pfam | zinc-finger of the FCS-type, C2-C2 | 85 | 134 | IPR007650 | - | |
| Ssu1g3079 | 165 | ProSiteProfiles | Zinc finger FLZ-type profile. | 91 | 135 | IPR007650 | - | |
| Ssu1g3079 | 165 | PANTHER | FCS-LIKE ZINC FINGER 5 | 1 | 163 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu1g3079 | Ssu-Chr1 | 80478804 | 80479510 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu1g3079 | - | - | aprc:113852663 | 221.09 |
Event-related genes