Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g3064 ATGGAAAATCAACAGTTAGTGGAGACAAATGGAGCAAGTTCTCAAACTGTTGAGAACCTGCGAGTAGATGATTTGGCAATAGATCAGGATAAACAATCAAAGGAGGCGAAAGCTGAGAATATTGGTCATGATGGCCCCGAGGATAAATTAGATGATATATCAGATGAGATAAATGACGTGGAAGATGTAAGGTCTAAGAGAGTAGATGAGAGTAGGGATTTGCAATCTGGAACTCAACCCGAAAATTTAGAGACCAAATCTGAAACTGAAGTCAGTACTGATAGGCAAGAGGATTCTGGTGATAAGATGGGTGCTGGTGGAGATTTTGAGCCTAAAATTCAAGAAGCAAATTTAGATGATAATTCTGGACAGAGTGACTTGGCTAAAGAGGTGGATGATAGGGAATCAACGCAGATGGAGGATAAGACAGATGAAATTCCAAGTGAGGACCACAATTTGGAGCCTGTGTTTGATGGAACCGAGGTTCCAGGGATGGAAGCTAACCGGAGCATGTCTGGACGGAGGTTGGATGTAGATCAGGACTCTCCAGGTGTGGTTGAGAAGGCTGTGGCTCTCAAGAATTTTGTTAAGGAGAAGAGTGCAGTGGCAGTCTCCACCATGATGCGTCGCCTTTCTGGAAAAAGAGATGAAGGTGCTGTGGATAATGCTGATGATGAAGCTAAGGATGTTTCAGACCCCGCAAAAATTGGGGAAACCAAAGTGGTGTCTGAGAAGACAGTGGAGAAATTTGACTGGAATCCCTTAAATTACATCAAGAAGTCATCCGATGATGTGGGAAACAAAACCGAGCAGAGGGACTCAATAGCCATGAAAGGAAGGATTATACTGTACACAAAACTAGGGTGCCAAGAATCTAAAGAGATCAGGCTATTTTTGCGTATGAAAAGGCTTAGATATGTCGAAATCAACATAGATGTGTACCCCAGTAGAAAGATGGAGCTGGAGAAGATTTCTGGATCTACATCTGTACCTAAGGTTTATTTCAATGAAATACTTATTGGAGGCTTGAGTGAGCTGAAGACACTAGATGAGTCTGGCAAGCTTGATGAGAAGGTTGACTTTCTTATTACCGAAGCACCATTATTTGAAGCCCCAGCTCCGCCTCTCTCTGGAGAGGATGGTGTGTCCAGCAGTGGACCAATTGATGAGATGGCAATTATTGTCCGCAAAATGAAAGAATCTATTGCTGTGAAGGACCGGTTGTATAAAATGCGCAGGTTCAATAACTGTTTTCTTGGCTCAGAAGCTATCAACTTCTTATCTGAAGATCAATATTTGGAAAGACCAGAGGCTGTTGAGTTTGCACGAAAGCTTGCTGGCAAACTGTTCTTTCGCCATGTTCTTGAtGAGAATCTATTTGAGGATGGAAATCACGTGTATCGGTTTTTGGATGATGACCCAATAGTGGTGTCACAATGTCATAACATTCCTAGAGGCATAATTACCTTGAAGCCCAAGCCTTTAACAGAAATTGCATCAAGGCTGAGGTTTCTGTCCCGTGCGATGTTTGAAGCCTATGCTTATGAAGATGGACGTCGTGTTGATTATATAAGTATACATGGAAGTGAGGAGTTCGCAAGGTATCTGAGAATAGTCGAAGAGCTCCAAAGAGTGGAAATATCGGACTCGTCTAGAGAAGAGAAGCTTGCATTCtttattaatctttataatatgATGGCCATCCATGCAATCTTAGTATTGGGCCATCCAGATGGAGCACTGGAAAGAAGGAAATTATTTGGAGAGTTCAAATATGTTATCAGTGGGTCAACCTACTCACTTTCAGCTATTCAAAATGGCATATTGAGGGGAAACCAGCGACCACCATATAACCTTAAGAAGCCATTTGGTGCAAAAGATAAACGCTCGACGGTGGCACTTCCGTACCCTGAGCCTCTTATTCATTTTGCTTTGGTATATGGCACCCGATCTGGACCTACGCTTCGGTGCTACTCTCCTGGAAATATTGATGAAGAGTTATTGGATGCTGCCCGTAATTTTTGA 2025 0.4242 MENQQLVETNGASSQTVENLRVDDLAIDQDKQSKEAKAENIGHDGPEDKLDDISDEINDVEDVRSKRVDESRDLQSGTQPENLETKSETEVSTDRQEDSGDKMGAGGDFEPKIQEANLDDNSGQSDLAKEVDDRESTQMEDKTDEIPSEDHNLEPVFDGTEVPGMEANRSMSGRRLDVDQDSPGVVEKAVALKNFVKEKSAVAVSTMMRRLSGKRDEGAVDNADDEAKDVSDPAKIGETKVVSEKTVEKFDWNPLNYIKKSSDDVGNKTEQRDSIAMKGRIILYTKLGCQESKEIRLFLRMKRLRYVEINIDVYPSRKMELEKISGSTSVPKVYFNEILIGGLSELKTLDESGKLDEKVDFLITEAPLFEAPAPPLSGEDGVSSSGPIDEMAIIVRKMKESIAVKDRLYKMRRFNNCFLGSEAINFLSEDQYLERPEAVEFARKLAGKLFFRHVLDENLFEDGNHVYRFLDDDPIVVSQCHNIPRGIITLKPKPLTEIASRLRFLSRAMFEAYAYEDGRRVDYISIHGSEEFARYLRIVEELQRVEISDSSREEKLAFFINLYNMMAIHAILVLGHPDGALERRKLFGEFKYVISGSTYSLSAIQNGILRGNQRPPYNLKKPFGAKDKRSTVALPYPEPLIHFALVYGTRSGPTLRCYSPGNIDEELLDAARNF 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g3064 674 MobiDBLite consensus disorder prediction 87 105 - -
Ssu1g3064 674 MobiDBLite consensus disorder prediction 1 20 - -
Ssu1g3064 674 MobiDBLite consensus disorder prediction 1 180 - -
Ssu1g3064 674 Gene3D Glutaredoxin 276 361 - -
Ssu1g3064 674 Gene3D - 388 475 IPR036388 -
Ssu1g3064 674 CDD DEP 390 468 - -
Ssu1g3064 674 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 402 469 IPR000591 GO:0035556
Ssu1g3064 674 ProSiteProfiles DEP domain profile. 398 471 IPR000591 GO:0035556
Ssu1g3064 674 Pfam Protein of unknown function, DUF547 549 674 IPR006869 -
Ssu1g3064 674 SUPERFAMILY Thioredoxin-like 271 359 IPR036249 -
Ssu1g3064 674 SMART DEP_3 398 471 IPR000591 GO:0035556
Ssu1g3064 674 Pfam Glutaredoxin 281 337 IPR002109 -
Ssu1g3064 674 ProSiteProfiles Glutaredoxin domain profile. 269 366 - -
Ssu1g3064 674 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 674 - -
Ssu1g3064 674 MobiDBLite consensus disorder prediction 59 74 - -
Ssu1g3064 674 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 1 674 - -
Ssu1g3064 674 SUPERFAMILY "Winged helix" DNA-binding domain 392 475 IPR036390 -
Ssu1g3064 674 MobiDBLite consensus disorder prediction 23 50 - -
Ssu1g3064 674 MobiDBLite consensus disorder prediction 125 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g3064 Ssu-Chr1 80085047 80088078 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g3064 - - ccaj:109797380 1177.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g3064 1 80085047 80088078 Ssu1g3064 1 80085047 80088078 ECH
Ssu6g2394 6 55707492 55713633 Ssu1g3064 1 80085047 80088078 PCT