Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2654 ATGGGTGAGGGGGAACGTTTTCAGCTGGGGACGGTGGGCGCGTTGACTCTTTCTGTGGTCTCATCTGTGTCGATTGTAATTTGCAATAAGGCGCTGATGAGTTCACTGCATTTCATTTTCGCTACAACTTTGACCAGCTGGCATCTGCTTGTCACATTTTGTTCCCTTCATGTGGCGCTCAAAATGAGATTCTTTGAGCACAAACCTTTTGAGCAGAAAGCTGTAATGGGATTCGGGATTTTAAATGGGATCTCAATTggacttttaaatttgagcctGGGGTTCAATTCTGTTGGCTTCTATCAAATGACTAAGCTGGCAATCATTCCTTGTACTGTACTGTTGGAGACCATTTTTCTTGGGAAGAGATTCAGTAAGAGAATTCAATTTTCCCTTTCTATCCTCCTTCTGGGTGTCGGCATTGCTACTGTCACAGATTTGCAGCTCAATGCTTTGGGTTCTTTCTTATCTTTGCTTGCAGTGATTACAACTTGTGTTGCTCAGATTATGACAAATACTATCCAGAAGAAGTTCAAGGTTTCTTCCACCCAGCTTCTGTATCAATCATGTCCATATCAAGCAGCAACCCTGTTAATCTCTGGTCCATATCTGGATAAACTTTTGACCAACCAAAATGTATTTGCTTTCAAGTATACAACACAAGTGACGGTTTTCATAGTTCTTTCTTGCCTTATCGCCATTTCTGTCAATTTTAGTACGTTCCTTGTTATTGGAAAAACATCTCCAGTCACCTATCAGGTTCTTGGACACCTGAAGACATGCCTTATATTGGCATTTGGTTATATACTACTCCAAGACCCATTTAGCTGGAGAAACATACTGGGTATTTTGATAGCCATGTTTGGGATGATTCTATATTCCTACTATTGTACTCTTGAGAATCAGCAAAAAACTGTTGAAGCTGCATCACAAGCATCCCAGGCAAGAGAAGGTGAATCTGATCCTCTGATTAATGTGGAAAATGGAAGTGCAGTTGTGAGTGATACTGTTGGACAAAGACAAATGTCCCCTGTATGGAGCAAGAACAAAGACTAG 1056 0.4034 MGEGERFQLGTVGALTLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALKMRFFEHKPFEQKAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETIFLGKRFSKRIQFSLSILLLGVGIATVTDLQLNALGSFLSLLAVITTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQAATLLISGPYLDKLLTNQNVFAFKYTTQVTVFIVLSCLIAISVNFSTFLVIGKTSPVTYQVLGHLKTCLILAFGYILLQDPFSWRNILGILIAMFGMILYSYYCTLENQQKTVEAASQASQAREGESDPLINVENGSAVVSDTVGQRQMSPVWSKNKD 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2654 351 MobiDBLite consensus disorder prediction 316 351 - -
Ssu1g2654 351 Pfam Triose-phosphate Transporter family 20 294 IPR004853 -
Ssu1g2654 351 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 3 325 - -
Ssu1g2654 351 PANTHER SOLUTE CARRIER FAMILY 35 3 325 - -
Ssu1g2654 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 294 - -
Ssu1g2654 351 MobiDBLite consensus disorder prediction 327 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2654 Ssu-Chr1 72120982 72124124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2654 1 325 Organic Solute Cotransporters AT1G21870 24.706 7.37e-23 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2654 K15285 - gmx:100786018 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2804 5 74030206 74033681 Ssu1g2654 1 72120982 72124124 PCT