Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2641 ATGGCTACATCTTCTCCTCTCCCTTTGCCCGAACTCCATTTTCTCTCCCCGCAAATCACCCCCAAACGCCGTCTCTCACTCTCCAAACTCCCCTCCTCAGCTTATTCCATTTCCCGCCACGCCACCTCCAACGCCTCTCTCCGCGCCGCGCGAATCCGCGCAATTAGAGAAGAATCCGCGTTGGCCGAGCGAGTGAACGACGTTGAATGGAGCGGAAACGGCGCCGCTGTCGCTAACGGAAGGGGCCGAGACGGTGCCGACGGCAATGGCGCCGTCGAGGGATACGTTAACGGCGCCACTAACGGAAGCTTGGTGAAGTACGCGTCCAAGCGGAGCGAGGATGGGAGGAAGAAAAGGTTGGAGGAGATTGGGAAAGAAGACGCGTGGTTTAAACAAACTGGGAACGACCAAGTTGAGGTAGCAGTGGCAGCTGGGGGGCGTTGGAGCAGGTTCAAGACTTACTCCACTATACAAAGAACATTGGAAATTTGGGGATTTGTTGCGACGTTCATCTTTAAGGCTTGGCTGAACAGCCAGAAGTTCTCTTACAAAGGTTCGTCCGCTAAAGgaaaaaaaaacttaaggcGGAAGGCCCTTGCCAAGTGGCTGAAGGAAAGCATTTTGAGATTAGGTCCTACATTCATCAAAATTGGTCAGCAGTTCTCCACTAGGGTGGACATTCTTCCTCAAGAATATGTTGACCAATTGTCCGAACTTCAGGATCAAGTTCCTCCATTTCCCTCAGAGACCTCTGTAGCCATTGTTGAAGAAGAGCTTGGAGCTCCTTTAGGTGATATCTTTGATCAGTTTGACTATGAACCAATAGCTGCTGCAAGTCTTGGTCAGGTTCATCGTGCAAGATTAAAGGGACAGGAGGTTGTTGTTAAAGTGCAAAGGCCTGGTCTcaaggatctttttgatattgATCTTAAAAACCTGAGGGTTATTGCTGAATATCTtcaaaaaattgatccaaaatcAGATGGTGCAAAGAGGGATTGGGTTGCTATTTATGATGAATGTGCCTCTGTCTTATATCAGgAGATTGATTACACCAAGGAGGCTGCTAATGCAGAATTGTTTGCAAGTAACTTTAAGAAGATGGATTATGTCAAAGTTCCTACAATCTACTGGGATTATACCACACCGCAGATTCTGACAATGGAGTATGTTCCAgggattaaaataaacaaaatacaagCTTTAGATCAACTGGGTGTTGACCGCAAAAGGTTAGGGAGATATGCTGTTGAGTCATACTTGGAACAAATTTTATCACATGGTTTCTTCCATGCTGACCCTCATCCTGGAAATATTGCAGTTGATGATGTCAATGGTGGAAGATTGATCTTCTATGATTTTGGAATGATGGGGAGTGTCAGTCCAAACATTCGAGAAGGTTTGCTCGAAGCATTTTATggaatttatgagaaaaatccAGACAAGGTCCTACAAGCAATGATTCAAATGGGAGTTCTTGTCCCTACTGGAGATATGACTGCTGTTAGAAGAACAGCACAATTCTTCCTCAACAGTTTTGAAGAGCGCTTGGCTGCACAAAGGCGAGAGAGAGAGGAAGCAACAACTGAACTTGGATTCAAAAAACCATTAAGCAAggaggaaaaaataaagaagaagaaacaacgTCTGGCTGCTATTGGTGAAGATTTATTATCTATTGCAGCAGACCAGCCCTTCCGATTTCCTGCTACATTTACATTTGTTGTTAGAGCCTTCTCagTGTTGGATGGCATTGGAAAGGGGCTTGACCCACGTTTTGACATTACTGAGATTGCCAAACCTTATGCCCTGGAGTTGCTGAGGTTTCGTGAAGCTGGGGTTGAAGTTCTCCTAAAGGACTTCAGGAAGAGATGGGATAGACAATCTCAAGCATTTTACAACTTATTCAGACAGGCTGATAGGGTTGACAAGCTTGCTGAAATTATCCAAAGACTGGAGCAAGGTGATCTAAAGCTCCGAGTTCGAACTTTGGAATCTGAGAGGGCATTCCAACGTGTTGCTGCAGTCCAGAAGACTATAGGGAATGCAGTAGTTGCTGGGAGCCTAATAAATCTTGCAACAGTGTTGTATCTCAATTCAATTCGTGTGCCTGCCATTGTAGCATATATCTTCTGTGCAATCTTTGGTTTTCAAGTGCTCTTGGGCATTGTGAAGGTCAAGAAGCTAGATGAACGGGAACGATTGATAACAGGGACTGCATAA 2223 0.4327 MATSSPLPLPELHFLSPQITPKRRLSLSKLPSSAYSISRHATSNASLRAARIRAIREESALAERVNDVEWSGNGAAVANGRGRDGADGNGAVEGYVNGATNGSLVKYASKRSEDGRKKRLEEIGKEDAWFKQTGNDQVEVAVAAGGRWSRFKTYSTIQRTLEIWGFVATFIFKAWLNSQKFSYKGSSAKGKKNLRRKALAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSETSVAIVEEELGAPLGDIFDQFDYEPIAAASLGQVHRARLKGQEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKKMDYVKVPTIYWDYTTPQILTMEYVPGIKINKIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSVSPNIREGLLEAFYGIYEKNPDKVLQAMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRREREEATTELGFKKPLSKEEKIKKKKQRLAAIGEDLLSIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLRFREAGVEVLLKDFRKRWDRQSQAFYNLFRQADRVDKLAEIIQRLEQGDLKLRVRTLESERAFQRVAAVQKTIGNAVVAGSLINLATVLYLNSIRVPAIVAYIFCAIFGFQVLLGIVKVKKLDERERLITGTA 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2641 740 CDD ABC1_ADCK3-like 239 487 - -
Ssu1g2641 740 PANTHER ABC TRANSPORTER-LIKE PROTEIN 3 738 - -
Ssu1g2641 740 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 3 738 - -
Ssu1g2641 740 SUPERFAMILY Protein kinase-like (PK-like) 240 483 IPR011009 -
Ssu1g2641 740 Coils Coil 510 530 - -
Ssu1g2641 740 Pfam ABC1 atypical kinase-like domain 238 486 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2641 Ssu-Chr1 71819208 71831515 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2641 - - gmx:100791330 1271.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2641 1 71819208 71831515 Ssu5g0656 5 15379740 15392757 PCT