Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2567 ATGGTGAGGCTCTTAGGATTGACTCGTGGGGAGGTTGATGAACCCAGGGAAATTGCTTCGAGGTCCAATTTGACAAGTGAGTCCAGTGAAAATGGGTGGCTCATCAGGTTCTTTGACTCATCGTTCTTCTGTGAGTGGATTGCTGTTAGCTACTTGTACAAGCATGATCACTCCGGGGTGCGTGATTATCTCTGTAATAGAATGTACACACTTCCCCTGCAAGGGATTGAGAGTTATTTGTTCCAAGTGTGTTACATGATGATACACAAGCCCAGCCCGTCTTTGGATAAGTTTGTCATAGACGTGTGCTCCAAGTCGCTTAAGATTGCTTTGAAGGTGCATTGGTTCTTATTGGCAGAGCTTGAGGACTCTGATGATAATGAAGGGATTAGTAGGATTCAGGAGAAGTGCCAGATCGCAGCCACGTTGATGGGCGAGTGGCCACCCTTGATACAGCCTCAAAGTGTGCCTTCGAGCCCTGGAGGCAAGAACCAAGTTTTGAATAAGATATTGTCGTCCAAACAGCGATTGTTGTCATTAACATCTTCACCGCCTACTCAGAAGTCTTTGTCATTCTCGCCTTCTTCGGGAAGCAATTTGCAGGAGGATGGTAGTCTGCAGTCTCCTGAGGAAAACAGGTTATTTAAGAAATTCATGCCAGGTCCAAAGGTTAGAGATGCATTGCTTTTTAGGAAGTCAGTGGAGAAAGATGATGATGAGTCTGAAAAGGATGGTTTTTTCAAGAGGCTTTTAAGAGATAGCAAAGGGGATGATGAGTTGGGCCAGAAGATTCGCGATGCTTTTCTCTTCCGTAAGTCATCTGAGAAATATGACGAAGATTCTGAAAAGGATAACTTCTTTAAAAGGCTCTTAAGGGACGGTAAAGGGGATGATGAAGAATCTGAAAAGGATGGTTTCTTTAGAAGGCTCTTAAGAGACAGTAAAGGTGAGGATGAGGATTTGGCCTCAAGTTCAGAGGGATTCTTTAAGAGATTGTTTCGTGATAGCAAGAATGATTCTGATGATAAAACACACACTAAGATAATGGAGGATGAAGAAAAAGAGGGTTTTTTCCGAAAGTTTTTCAGAGAGAAATTTGAGGATAAGAAGGATGGGAATGACGAAGGAGATATTACAAATTCTGAAGAGAAATGTGCAAAGCCTGCCGAAGAGGATGAAAAAGAAGGGTTTTTCCGGAAATTCTTTAAGGATAAATTTGATGACAAGAAAGatacaaatgataaaattgaaGATGGTACAACCAATGTTGAGGAAGAAGAGCCTTCTGATTTTTCTTTGTTCAAAAGAATATTTCGTGTGCACCCTGAAGATGGTAAAAGTAGTTCAGCCAATGAAAACAACGGTGGGTTGTTTGAAAGTAGTCCAGGTACAGAGAGTTTTTTCCGCAAATTGTTTAGAGACCGTGACCGATCAATTGAAGATTCAGAGCTATTGGGGTCAAAAAAGCAGAAAGAGAAGCATCCTGGATCGCCAAAGCAGCGAAATGAGAAATCAGGAACAAAGCCCCCACTTCCAATTAATCCATCACAGTTCCGGAAAGGAGCTTACCATGAGTCATTGGATTTTGTGCTGTCATTATGTGAGACATCATTTGGGTTAGTGGATGTATTTCCAGTTGAAGATCGCAAAAGTGCCCTGCATGAGTCGCTTGCAGAGATCAATTTACATTTCACACAGTCTCAGAATACTGGAGGAGTTTGTTTTCCGTTGGGAAAAGGCCTGTACCGTGTGCTTCATATACCTGAAGATGAAGCTGTTCTCTTGAATTCTAGGGAAAAGGCACCTTACCTGATTTGTGTTGAAGTTTTGAGATGTGAAATGCCAAGCAATTCCAAGGAGACATTTAGTTCTCAGAAACTTTCTAAAGGTGGGATTCCTTTGGCAAATGGAGATGCTCTCTTGCAAAAACCGCCTCCTTGGGCATATCCATTATGGACAGCACAAGAAGCATATCGCAATAGCAATGATAGAATGTCCAGATCAACTGCTGAGGCTATTGACCAGGCAATGACCCATGTGTCTGATGCAAAAGTGAAATTTGTTAGTGTGAATCTTTCTGTGGAAGCACAATTTCATGGTCGGCCAGAGAAGACTGAAGCAGATCTATGTGGCGGCAATCGGCATCCTACTTCAATTTACAGAGACGATATACAAGAAGTGGCAAGGCCAGGACATGACAGTTGTATGGAGTGGGTGAGTGTAGTGTTGAAAGCTGGTCCTGGGGTTAAAATGGAAGATATTGAGGATCAAGCACCAAGACGGCGGAAGGAACATCGTCGTGTTCCAAGTACAGTGGCAATGGAGGAAGTAAAGGCTGCTGCAGCAAAGGGAGAAGCACCCCTTGGACTCCCTTTGAAAGGTGCTGGTCAAGATTCATCAGATGCACCACCAAGGGCTAATGGAATTACCCCCAAAGCTAGTGATGCCTTGTCTGGTGAACTTTGGGAggtaaaaaaagagaggataCGAAAGGCTTCTGTGCATGGGAATTTACCTGGTTGGGACTTGCGATCTGTTATTGTAAAGAGTGGGGACGATTGTAGGCAGGAGCATCTGGCAGTTCAACTTATTTCACACTTTTATGATTACCCTAGGAGCATGCAGCAGACTCTTGTTCGTGTTTCTTGTCATGTTGCTGACTATCATTTCATTTTGATGCCAGATATTTTCCAAGAAGCTGGCCTACCTCTCTGGCTGCGACCTTATGAAGTGTTATGTACTTCTTCTTACACTGCTCTTATTGAAACAATTCCAGATACGGCTTCTCTACATTCTATCAAGAGTAGATATCCCAACATCTCAAGTTTACGTGAATTTTTCATTGCCAAATATCAAGAAGATTCAAGTTTTAAACTTGCCCAGAGGAACTTTGTTGAAAGTATGGCTGGATATTCCCTGGTTTGCTACCTTCTGCAGGTGAAGGATAGGCATAATGGGAACCTCTTAATGGATGAAGAAGGTCATATTATACATATTGATTTTGGCTTCATGCTTTCCAATTCACCTGGTGGTGTTAATTTTGAAAGTGCACCTTTCAAATTAACCCGAGAGCTTCTTGAGGTCATGGATTCTGATGCTGAGGGCATTCCAAGCGAGTTCTTTGATTATTTCAAgGTTTTATGCATTCAAGGCTTCCTTACTTGCCGTAAGCATGCTGAACGTATTATTCTTCTTGTGGAGATGTTGCAGGACTCTGGTTTCCCCTGCTTTAAAGGTGGTCCACGGACAATACAGAACCTACGAAAGCGTTTCCATCTCAATTTAACTGAAGAGCAATGTGTATCTTTGGTGCTTTCCCTCATTAGCAGCAGCCTGGATGCATGGCGGACACGGCAGTATGATTATTACCAGAGGGTTTTGAACGGGATATTGTGA 3396 0.424 MVRLLGLTRGEVDEPREIASRSNLTSESSENGWLIRFFDSSFFCEWIAVSYLYKHDHSGVRDYLCNRMYTLPLQGIESYLFQVCYMMIHKPSPSLDKFVIDVCSKSLKIALKVHWFLLAELEDSDDNEGISRIQEKCQIAATLMGEWPPLIQPQSVPSSPGGKNQVLNKILSSKQRLLSLTSSPPTQKSLSFSPSSGSNLQEDGSLQSPEENRLFKKFMPGPKVRDALLFRKSVEKDDDESEKDGFFKRLLRDSKGDDELGQKIRDAFLFRKSSEKYDEDSEKDNFFKRLLRDGKGDDEESEKDGFFRRLLRDSKGEDEDLASSSEGFFKRLFRDSKNDSDDKTHTKIMEDEEKEGFFRKFFREKFEDKKDGNDEGDITNSEEKCAKPAEEDEKEGFFRKFFKDKFDDKKDTNDKIEDGTTNVEEEEPSDFSLFKRIFRVHPEDGKSSSANENNGGLFESSPGTESFFRKLFRDRDRSIEDSELLGSKKQKEKHPGSPKQRNEKSGTKPPLPINPSQFRKGAYHESLDFVLSLCETSFGLVDVFPVEDRKSALHESLAEINLHFTQSQNTGGVCFPLGKGLYRVLHIPEDEAVLLNSREKAPYLICVEVLRCEMPSNSKETFSSQKLSKGGIPLANGDALLQKPPPWAYPLWTAQEAYRNSNDRMSRSTAEAIDQAMTHVSDAKVKFVSVNLSVEAQFHGRPEKTEADLCGGNRHPTSIYRDDIQEVARPGHDSCMEWVSVVLKAGPGVKMEDIEDQAPRRRKEHRRVPSTVAMEEVKAAAAKGEAPLGLPLKGAGQDSSDAPPRANGITPKASDALSGELWEVKKERIRKASVHGNLPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDYPRSMQQTLVRVSCHVADYHFILMPDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRYPNISSLREFFIAKYQEDSSFKLAQRNFVESMAGYSLVCYLLQVKDRHNGNLLMDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGIPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLQDSGFPCFKGGPRTIQNLRKRFHLNLTEEQCVSLVLSLISSSLDAWRTRQYDYYQRVLNGIL 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2567 1131 MobiDBLite consensus disorder prediction 481 501 - -
Ssu1g2567 1131 MobiDBLite consensus disorder prediction 447 461 - -
Ssu1g2567 1131 Pfam Phosphatidylinositol 3- and 4-kinase 845 1077 IPR000403 -
Ssu1g2567 1131 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 967 987 IPR018936 GO:0016301
Ssu1g2567 1131 PANTHER PHOSPHATIDYLINOSITOL KINASE 4 258 IPR015433 GO:0046854|GO:0048015
Ssu1g2567 1131 CDD PI4Kc_III_beta 814 1131 - -
Ssu1g2567 1131 Gene3D - 45 146 IPR042236 -
Ssu1g2567 1131 MobiDBLite consensus disorder prediction 481 517 - -
Ssu1g2567 1131 PANTHER BNAA02G34040D PROTEIN 262 331 - -
Ssu1g2567 1131 SMART pi3k_hr1_6 845 1129 IPR000403 -
Ssu1g2567 1131 PANTHER PHOSPHATIDYLINOSITOL KINASE 262 331 IPR015433 GO:0046854|GO:0048015
Ssu1g2567 1131 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 823 1116 IPR000403 -
Ssu1g2567 1131 PANTHER PHOSPHATIDYLINOSITOL KINASE 324 1131 IPR015433 GO:0046854|GO:0048015
Ssu1g2567 1131 MobiDBLite consensus disorder prediction 784 813 - -
Ssu1g2567 1131 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 848 862 IPR018936 GO:0016301
Ssu1g2567 1131 PANTHER BNAA02G34040D PROTEIN 324 1131 - -
Ssu1g2567 1131 Gene3D - 770 924 - -
Ssu1g2567 1131 SUPERFAMILY Protein kinase-like (PK-like) 560 1124 IPR011009 -
Ssu1g2567 1131 MobiDBLite consensus disorder prediction 369 393 - -
Ssu1g2567 1131 MobiDBLite consensus disorder prediction 408 429 - -
Ssu1g2567 1131 MobiDBLite consensus disorder prediction 181 208 - -
Ssu1g2567 1131 MobiDBLite consensus disorder prediction 443 463 - -
Ssu1g2567 1131 PANTHER BNAA02G34040D PROTEIN 4 258 - -
Ssu1g2567 1131 Gene3D - 929 1129 IPR036940 GO:0016301
Ssu1g2567 1131 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Ssu1g2567 1131 SUPERFAMILY ARM repeat 54 126 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2567 Ssu-Chr1 70267562 70278768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2567 1 1130 Lipid Metabolism Gene Families AT5G09350 68.675 0.0 1528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2567 K19801 - gmx:100781715 1956.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2857 5 74878301 74892342 Ssu1g2567 1 70267562 70278768 PCT