Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2491 ATGCAGCAGACGCTGGTCACTCTCTCGGAGCAACAGCAAGAGGAGAAGGACATCGAGCTGGTGGTGGCGCCGCCGGCGTGCCGGCGCCCCTCGCGGCGCGTGTCTCCGGGTGCGGTGGAGAGGGCGCTCCCGAACGGCGACATCTACAGCGGAGGCCTATGGGGGAACGTGCCGCACGGCAGCGGGAAATACCTCTGGTCGGACGGGTGCATGTACGAGGGCGAGTGGAAGAAAGGGAAAGCGTGCGGCAAGGGGCGGTTCTCGTGGCCCTCGGGCGCGACCTACGAGGGCGAGTTCGCGTCGGGCCGGATGCACGGGCAGGGCGCGTTCGTCGGCGCGGAGGGCGACGCGTACCGCGGCGCGTGGGCCTCGGACCGGAAGCACGGCTTCGGGGAGAAGCGCTACGCTAACGGCGACGTCTACGAGGGCTGGTGGAGGTGCAACCTGCAGGAGGGGAGCGGGAGGTACGTGTGGCGGAACGGGAACGAGTACGTGGGGGAGTGGAAGGGCGGTGCGATATGCGGGAAGGGCGTGCTGGCGTGGAAGAACGGGAACCGTTACGAGGGGTGTTGGGAGAACGGGGTGCCCAAGGGGAAGGGGGTGTTTACGTGGCGCGACGGGAGCACCTCCTCCGGGAACTGGGGGAAGGAGTTTGTCAATGAGAAAAGAGTGTCGGTGGATGGGTGTAATAAGAGTGTGAGTTTTCCCAGGCTTTGTATTTGGGAGCTCGATGGGGAGGCTGGGGATATTACTTGTGACATTGTGGAGGCGTCTATGTTTTACGGCGGCGGGTGTGAGAGTGGTGGAGATTCGCAGTTGCAGAGGAGTCCTTGTTGTTCGGTTGATGGGGATGTTAAGAAACCCGGTCACACTGTTTCTAAGGGGCATAAGAATTATGATTTGATGCTTAATCTTCAACTGGGTATTCGATACTCTGTTGGGAAGCATGCTTCGGTTTTGAGAGAGCTTAGGCCTGGGGATTTTGATCCCAAGGAGAAGTTCTGGACGAGATTCCCTCCAGAGGGGTCTAAGTTTACACCTCCACATCAGTCGGTGGATTTCAGGTGGAAAGATTACTGTCCCGTGGTGTTCAGACATCTAAGGGAATTATTTGGCATAGATCCTGCGGAGTACATGCTTGCTATTTGCGGCAATGACACACTTAGGGAGATGTCTTCTCCTGGAAAAAGTGGAAGCTTCTTTTACCTCACTCAGGACGGCCGGTTCATTATCAAAACCTTGAAGAAGTCCGAAGTCAAGGTGCTCATTAGGATGCTTCCAAGTTACTATCAACATGTTTGTCAGTACAAGAATTCCCTGGTAACAAAATTCCTGGGGGTTCATTGTGTCAAACCTATTGGAGGTCAGAAGACTCGGTTTATTGTGATGGGCAATGTATTTTGTTCGGAGTATCGTATACATAAGCGGTTTGACCTCAAAGGTTCTTCTCATGGTCGTACAACCGATAAACCCAGGGAGGAGATTGATGAGACTACCACTCTTAAAGACCTTGATCTTTGTTTTGTCTTCCGCCTGGAGAAGTCTTGGTTTCAAGAGCTTATATGGCAACTTGATAAGGACTGTGAATTCCTGGAAGCAGAGGGAATAATGGATTACAGTTTTTTGATTGGCCTTCATTTTCGTGATGATAGCTCAGTTGATGAAGAAAAGAGTTTACCAATCGAGTTGTGTTCAGGCAAGAGAGAATTGCAAAATGATGACATAGAGGATATGAAGTGGATACCCATAGGCCGGGGACCTCTAATTCGGCTGGGAACAAACATGCCTGCCAGAGCTGAGAGTGTGTGTAAAGCTGGATTGGATCCGCACACTGGTACTGGAAGTAGCAATTCTACCCCTTCAGAGAGTGGTGGTGAGGTCTCTGATGTAATCCTCTACTTTGGTATAATTGACATTCTCCAAGATTATGATATAAGCAAAAAGTTAGAGCATGCATACAAGTCATTGCAAGTGGATCCCTCCTCAATCTCAGCCGTTGATCCCAAGCTATACTCCAAAAGGTTTAGGGAATTCATACACAGAATCTTTGTGGAGGACAAATGA 2064 0.5208 MQQTLVTLSEQQQEEKDIELVVAPPACRRPSRRVSPGAVERALPNGDIYSGGLWGNVPHGSGKYLWSDGCMYEGEWKKGKACGKGRFSWPSGATYEGEFASGRMHGQGAFVGAEGDAYRGAWASDRKHGFGEKRYANGDVYEGWWRCNLQEGSGRYVWRNGNEYVGEWKGGAICGKGVLAWKNGNRYEGCWENGVPKGKGVFTWRDGSTSSGNWGKEFVNEKRVSVDGCNKSVSFPRLCIWELDGEAGDITCDIVEASMFYGGGCESGGDSQLQRSPCCSVDGDVKKPGHTVSKGHKNYDLMLNLQLGIRYSVGKHASVLRELRPGDFDPKEKFWTRFPPEGSKFTPPHQSVDFRWKDYCPVVFRHLRELFGIDPAEYMLAICGNDTLREMSSPGKSGSFFYLTQDGRFIIKTLKKSEVKVLIRMLPSYYQHVCQYKNSLVTKFLGVHCVKPIGGQKTRFIVMGNVFCSEYRIHKRFDLKGSSHGRTTDKPREEIDETTTLKDLDLCFVFRLEKSWFQELIWQLDKDCEFLEAEGIMDYSFLIGLHFRDDSSVDEEKSLPIELCSGKRELQNDDIEDMKWIPIGRGPLIRLGTNMPARAESVCKAGLDPHTGTGSSNSTPSESGGEVSDVILYFGIIDILQDYDISKKLEHAYKSLQVDPSSISAVDPKLYSKRFREFIHRIFVEDK 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2491 687 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 284 465 IPR027484 -
Ssu1g2491 687 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 23 687 IPR023610 -
Ssu1g2491 687 PIRSF PIP5K_plant 1 222 IPR017163 GO:0005524|GO:0016308
Ssu1g2491 687 PIRSF PIP5K_plant 216 687 IPR017163 GO:0005524|GO:0016308
Ssu1g2491 687 MobiDBLite consensus disorder prediction 604 625 - -
Ssu1g2491 687 MobiDBLite consensus disorder prediction 610 625 - -
Ssu1g2491 687 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 295 683 IPR002498 GO:0016307|GO:0046488
Ssu1g2491 687 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 383 682 IPR002498 GO:0016307|GO:0046488
Ssu1g2491 687 Pfam MORN repeat 95 116 IPR003409 -
Ssu1g2491 687 Pfam MORN repeat 72 93 IPR003409 -
Ssu1g2491 687 Pfam MORN repeat 118 140 IPR003409 -
Ssu1g2491 687 Pfam MORN repeat 49 71 IPR003409 -
Ssu1g2491 687 Pfam MORN repeat 164 186 IPR003409 -
Ssu1g2491 687 Pfam MORN repeat 187 209 IPR003409 -
Ssu1g2491 687 Pfam MORN repeat 141 162 IPR003409 -
Ssu1g2491 687 Gene3D - 466 683 - -
Ssu1g2491 687 SMART PIPK_2 324 684 IPR002498 GO:0016307|GO:0046488
Ssu1g2491 687 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 23 687 - -
Ssu1g2491 687 SUPERFAMILY SAICAR synthase-like 294 683 - -
Ssu1g2491 687 CDD PIPKc_AtPIP5K_like 298 682 - -
Ssu1g2491 687 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 44 171 - -
Ssu1g2491 687 SMART morn 70 91 IPR003409 -
Ssu1g2491 687 SMART morn 116 137 IPR003409 -
Ssu1g2491 687 SMART morn 139 160 IPR003409 -
Ssu1g2491 687 SMART morn 162 183 IPR003409 -
Ssu1g2491 687 SMART morn 185 206 IPR003409 -
Ssu1g2491 687 SMART morn 93 114 IPR003409 -
Ssu1g2491 687 SMART morn 47 68 IPR003409 -
Ssu1g2491 687 Gene3D - 34 78 - -
Ssu1g2491 687 Gene3D - 171 237 - -
Ssu1g2491 687 Gene3D - 124 170 - -
Ssu1g2491 687 Gene3D - 79 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2491 Ssu-Chr1 68847280 68851026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu1g2491 10 686 Acyl Lipid Metabolism Gene Families AT1G77740 64.828 0.0 935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2491 K00889 - gmx:100808235 1322.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g2921 5 75857648 75860002 Ssu1g2491 1 68847280 68851026 PCT